RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 GLDCP23378 1020 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 OR1E1P30953 314 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 RFC1P35251 1148 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 METAP1P53582 386 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 KRT83P78385 493 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 GRIK2Q13002 908 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 DLG2Q15700 870 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 ASIC2Q16515 512 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 ARL13BQ3SXY8 428 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 SFMBT2Q5VUG0 894 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 SCYL2Q6P3W7 929 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 DNAAF5Q86Y56 855 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 ATP11CQ8NB49 1132 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 KDM1BQ8NB78 822 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 FAM172AQ8WUF8 416 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 DNASE2BQ8WZ79 361 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 OR8D1Q8WZ84 308 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 SYN2Q92777 582 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 BIRC7Q96CA5 298 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 MCEEQ96PE7 176 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 HAPLN3Q96S86 360 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 PSMB7Q99436 277 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 SGK2Q9HBY8 427 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 TBC1D30Q9Y2I9 924 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 OR51B4Q9Y5P0 310 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 DOCK9Q9BZ29 2069 aa13.98□□□□□ -0.17
VPS9D1-204ENST00000565023 CACNA1EQ15878 2313 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 A0A1B0GVT2 93 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ANKRD62A6NC57 917 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 DRGXA6NNA5 263 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 K7ERQ8 282 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ENDOD1O94919 500 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 MT-CO1P00395 513 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 SRCP12931 536 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 RRM1P23921 792 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 CSNK1EP49674 416 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ZBED6P86452 979 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ZNF252P-AS1Q0IIN9 211 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ELAVL3Q14576 367 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 C5orf22Q49AR2 442 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 C6orf118Q5T5N4 469 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 KIAA0895LQ68EN5 471 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 SPECC1LQ69YQ0 1117 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 NCEH1Q6PIU2 408 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 WDR59Q6PJI9 974 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 MON1BQ7L1V2 547 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 BNIPLQ7Z465 357 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 PHF13Q86YI8 300 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 VSTM4Q8IW00 320 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 SH2D3CQ8N5H7 860 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 AADATQ8N5Z0 425 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 OR14C36Q8NHC7 312 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 FRS2Q8WU20 508 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 C1orf74Q96LT6 269 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ANP32EQ9BTT0 268 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ZYG11BQ9C0D3 744 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 TAS2R14Q9NYV8 317 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 VPS51Q9UID3 782 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 SCML1Q9UN30 329 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 ZZEF1O43149 2961 aa13.97□□□□□ -0.17
VPS9D1-204ENST00000565023 CBX4O00257 560 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 CCP110O43303 1012 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ATMINO43313 823 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ADH1BP00325 375 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 C5AR1P21730 350 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ADRA1BP35368 520 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 PTPN9P43378 593 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 GALCP54803 685 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 HDAC4P56524 1084 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 RPL7AP62424 266 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 SFSWAPQ12872 951 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 FOXC1Q12948 553 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ARID5BQ14865 1188 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 HGSNATQ68CP4 663 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 DCUN1D2Q6PH85 259 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 USP30Q70CQ3 517 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ARCQ7LC44 396 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 STRADAQ7RTN6 431 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ADAT2Q7Z6V5 191 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 SETD3Q86TU7 594 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 C3orf20Q8ND61 904 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 CPLX3Q8WVH0 158 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 C2orf49Q9BVC5 232 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 TNKS2Q9H2K2 1166 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 SLC32A1Q9H598 525 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 HAUS4Q9H6D7 363 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 IL21RQ9HBE5 538 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 TM9SF3Q9HD45 589 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 OR12D3Q9UGF7 316 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 DNAI1Q9UI46 699 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 SARDHQ9UL12 918 aa13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-204ENST00000565023 ACTL7AQ9Y615 435 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms