RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PDAP1Q13442 181 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 APOFQ13790 326 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 STXBP2Q15833 593 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 DGKDQ16760 1214 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GLRA4Q5JXX5 417 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 KDELC2Q7Z4H8 507 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RNF135Q8IUD6 432 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TMEM102Q8N9M5 508 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GIPC3Q8TF64 312 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PAIP1Q9H074 479 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TUT1Q9H6E5 874 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CYP4F12Q9HCS2 524 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GTSE1Q9NYZ3 720 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TLL2Q9Y6L7 1015 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 VDRP11473 427 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PGAM1P18669 254 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TPSB2P20231 275 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CNTFP26441 200 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GARSP41250 739 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SEMA5AQ13591 1074 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TPSAB1Q15661 275 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TREML2Q5T2D2 321 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NCBP2-AS2Q69YL0 99 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF280DQ6N043 979 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 XKR5Q6UX68 686 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ILDR2Q71H61 639 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 FASTKD5Q7L8L6 764 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF554Q86TJ5 538 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RBM12BQ8IXT5 1001 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ACMSDQ8TDX5 336 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ACE2Q9BYF1 805 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 BCO2Q9BYV7 579 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GCOM2Q9BZD3 368 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF214Q9UL59 606 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 AP4S1Q9Y587 144 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 A0A0A0MRY4 1105 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 LRRC37AA6NMS7 1700 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PPEF2O14830 753 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 HDAC3O15379 428 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 FAM163BP0C2L3 166 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RPL14P50914 215 aaKnown RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SOWAHAQ2M3V2 549 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 OLFML1Q6UWY5 402 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SULF1Q8IWU6 871 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SPATA13Q96N96 652 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GBA2Q9HCG7 927 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 KLHL8Q9P2G9 620 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 AURKCQ9UQB9 309 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RUVBL2Q9Y230 463 aaKnown RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 COPG1Q9Y678 874 aaKnown RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ATP6AP2A0A1C7CYW4 349 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF839A8K0R7 811 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MATN2O00339 956 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GRID2O43424 1007 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ATP6AP2O75787 350 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PLK1P53350 603 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CXCL9Q07325 125 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 HSDL1Q3SXM5 330 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 APBB2Q92870 758 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MRPL45Q9BRJ2 306 aaKnown RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 R3HDMLQ9H3Y0 253 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PRDM12Q9H4Q4 367 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 EFCAB1Q9HAE3 211 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF831Q5JPB2 1677 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 IFRD2Q12894 506 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TICAM1Q8IUC6 712 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 DDI1Q8WTU0 396 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CDHR1Q96JP9 859 aa20.86■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ALDH1A2O94788 518 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ACAT1P24752 427 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PPARGP37231 505 aaPredicted RBP20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NME3Q13232 169 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 OR9I1Q8NGQ6 314 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 LPGAT1Q92604 370 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TRPC7Q9HCX4 862 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TIMMDC1Q9NPL8 285 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CDYLQ9Y232 598 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 BRCA2P51587 3418 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PRSS51A0A1B0GVH4 220 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 AKAP10O43572 662 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ALOX15P16050 662 aaPredicted RBP20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SPRP35270 261 aaPredicted RBP20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SLC6A3Q01959 620 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 IKBKEQ14164 716 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SLC44A4Q53GD3 710 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 LRRC8EQ6NSJ5 796 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 HERC6Q8IVU3 1022 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF567Q8N184 647 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RP9Q8TA86 221 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 DPEP3Q9H4B8 488 aa20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SOX17Q9H6I2 414 aaPredicted RBP20.85■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CCDC130P13994 396 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CTBSQ01459 385 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GRM3Q14832 879 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PPP1R3AQ16821 1122 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 OGFOD2Q6N063 350 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RMND5BQ96G75 393 aaPredicted RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TBCBQ99426 244 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF670Q9BS34 389 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MYOZ2Q9NPC6 264 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms