RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TMIEQ8NEW7 156 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 ZCCHC14Q8WYQ9 949 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 SERAC1Q96JX3 654 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 GDF3Q9NR23 364 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 PIGVQ9NUD9 493 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 AJAP1Q9UKB5 411 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 FAM208BQ5VWN6 2430 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 TLR4O00206 839 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PES1O00541 588 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 CAPNS1P04632 268 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 RHOCP08134 193 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 ATXN1LP0C7T5 689 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 DRD3P35462 400 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 SULT1E1P49888 294 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 CENPCQ03188 943 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 KCNT1Q5JUK3 1230 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 C14orf80Q86SX3 495 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 CIR1Q86X95 450 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 XYLT1Q86Y38 959 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PNPLA1Q8N8W4 532 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PIP4K2CQ8TBX8 421 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 SLC6A18Q96N87 628 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 MUC3BQ9H195 1237 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 EBF2Q9HAK2 575 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PREBQ9HCU5 417 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 SAMSN1Q9NSI8 373 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PPARGC1AQ9UBK2 798 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 TMEM59LQ9UK28 342 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 PCDHGA1Q9Y5H4 931 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 FHOD1Q9Y613 1164 aa12.5□□□□□ -0.41
GTF3C1-204ENST00000564664 CFAP47Q6ZTR5 3102 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 ILVBLA1L0T0 632 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 E9PAM4 449 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 F8VZ95 297 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 KCNK3O14649 394 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 CNTN5O94779 1100 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 ENDOD1O94919 500 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 PRNPP04156 253 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 VAV1P15498 845 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 NXPH1P58417 271 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 SCAPQ12770 1279 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 STAT4Q14765 748 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 OTUD1Q5VV17 481 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 RETSATQ6NUM9 610 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 BNIPLQ7Z465 357 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 PROSER1Q86XN7 944 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 ZNF683Q8IZ20 524 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 DCAF4L2Q8NA75 395 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 OR52K2Q8NGK3 314 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 FAM174AQ8TBP5 190 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 SAP25Q8TEE9 199 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 DKK4Q9UBT3 224 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 SARDHQ9UL12 918 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 BTBD3Q9Y2F9 522 aa12.49□□□□□ -0.41
GTF3C1-204ENST00000564664 ASPMQ8IZT6 3477 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 PRAMEF26H0Y7S4 382 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 WNT1P04628 370 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 ITGAVP06756 1048 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 PNMA6AP0CW24 399 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 SRCP12931 536 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 OR1E1P30953 314 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 CHRNA3P32297 505 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 ETFBP38117 255 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 RECQLP46063 649 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 NOMO3P69849 1222 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 CDR2Q01850 454 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 NRG1Q02297 640 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 CNTN1Q12860 1018 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 SMAD1Q15797 465 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 ARL13BQ3SXY8 428 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 ALFQ53S48 1182 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 FKBP15Q5T1M5 1219 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 AGBL4Q5VU57 503 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 TMPRSS12Q86WS5 348 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 EPS8L1Q8TE68 723 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 TBCBQ99426 244 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 CEP44Q9C0F1 390 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 CCDC86Q9H6F5 360 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 DYRK4Q9NR20 520 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 VPS51Q9UID3 782 aa12.48□□□□□ -0.41
GTF3C1-204ENST00000564664 RTN2O75298 545 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 LDOC1O95751 146 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 MT-CO1P00395 513 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 CYP1A1P04798 512 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 MMEP08473 750 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 MMP8P22894 467 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 IRAK1P51617 712 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms