RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CASQ2O14958 399 aaPredicted RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 NOL3O60936 208 aaKnown RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 ANXA9O76027 345 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ATG7O95352 703 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ENPEPQ07075 957 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 WASHC5Q12768 1159 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 TARBP2Q15633 366 aaKnown RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 CNGA3Q16281 694 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 LRRC8EQ6NSJ5 796 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 UGT2A3Q6UWM9 527 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 LINC00523Q86TU6 105 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 CATSPER1Q8NEC5 780 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 MCRS1Q96EZ8 462 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PIWIL1Q96J94 861 aaKnown RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 TRIM62Q9BVG3 475 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 CDYLQ9Y232 598 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 A0A0J9YVX5 310 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 SUPT7LO94864 414 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 FBXO21O94952 628 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 OR6B1O95007 311 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 TNFAIP8O95379 198 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 METTL18O95568 372 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 STMN1P16949 149 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 NDUFV1P49821 464 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PLK1P53350 603 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 UBAP2LQ14157 1087 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 CSHL1Q14406 222 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 URGCPQ8TCY9 931 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 BLOC1S5Q8TDH9 187 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 CERS2Q96G23 380 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 RPRD1AQ96P16 312 aaPredicted RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 XYLT2Q9H1B5 865 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 STN1Q9H668 368 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 ANLNQ9NQW6 1124 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 CACNG4Q9UBN1 327 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 ZNF112Q9UJU3 913 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PAIP2BQ9ULR5 123 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 AP3B1O00203 1094 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 TREHO43280 583 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 TRIM13O60858 407 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PEX2P28328 305 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 NAGLUP54802 743 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 MCCD1P59942 119 aaPredicted RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 SLC25A11Q02978 314 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 ANO4Q32M45 955 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 SEL1L3Q68CR1 1132 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 KLHDC10Q6PID8 442 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 TTC30AQ86WT1 665 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 MARVELD2Q8N4S9 558 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 LRRC52Q8N7C0 313 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 TRIML2Q8N7C3 387 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 TDRD5Q8NAT2 981 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 PHF21BQ96EK2 531 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 MRPL1Q9BYD6 325 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 NT5MQ9NPB1 228 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 SYBUQ9NX95 663 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 HSFX1Q9UBD0 423 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 AAR2Q9Y312 384 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 PLLPQ9Y342 182 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PSMD3O43242 534 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 DENRO43583 198 aaKnown RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 EDN1P05305 212 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 CDH17Q12864 832 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 MSLNQ13421 630 aaPredicted RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 DUSP28Q4G0W2 176 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PPM1JQ5JR12 505 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 OVOS1Q6IE37 1185 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PTAR1Q7Z6K3 402 aaPredicted RBP10.64□□□□□ -0.71
RNF40-204ENST00000563683 EFHBQ8N7U6 833 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 CEP70Q8NHQ1 597 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 BHMTQ93088 406 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 CAB39LQ9H9S4 337 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 CYTH4Q9UIA0 394 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 PCDHA11Q9Y5I1 949 aa10.64□□□□□ -0.71
RNF40-204ENST00000563683 A0A0G2JLL6 359 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 RNF103-CHMP3A0A140T963 221 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 MFSD11O43934 449 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 CHEK2O96017 543 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 PGK1P00558 417 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 HSPA8P11142 646 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 RAG1P15918 1043 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 NFKB1P19838 968 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 MRPS5P82675 430 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 EFEMP1Q12805 493 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 TSTA3Q13630 321 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 CYTH1Q15438 398 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 ISLR2Q6UXK2 745 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 PRRT2Q7Z6L0 340 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 PSTKQ8IV42 348 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 UNC5BQ8IZJ1 945 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 SPATA6LQ8N4H0 392 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 NIPA2Q8N8Q9 360 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 USP13Q92995 863 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 TCF7L2Q9NQB0 619 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 DDX18Q9NVP1 670 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 ADAMTS6Q9UKP5 1117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms