RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 CA9Q16790 459 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 CACUL1Q86Y37 369 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 PSTKQ8IV42 348 aaKnown RBP20.77■□□□□ 0.92
CMTM3-206ENST00000563672 NIPA2Q8N8Q9 360 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 RTL3Q8N8U3 475 aaKnown RBP20.77■□□□□ 0.92
CMTM3-206ENST00000563672 TC2NQ8N9U0 490 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 TOE1Q96GM8 510 aaKnown RBP20.77■□□□□ 0.92
CMTM3-206ENST00000563672 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 EIF3CQ99613 913 aaKnown RBP20.77■□□□□ 0.92
CMTM3-206ENST00000563672 SPON2Q9BUD6 331 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 SNRNP25Q9BV90 132 aaKnown RBP20.77■□□□□ 0.92
CMTM3-206ENST00000563672 PACSIN1Q9BY11 444 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 ACE2Q9BYF1 805 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-206ENST00000563672 DEF6Q9H4E7 631 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 DNAI1Q9UI46 699 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 USP18Q9UMW8 372 aa20.77■□□□□ 0.92
CMTM3-206ENST00000563672 AKR1B10O60218 316 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 PRPSAP2O60256 369 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 RNASEH1O60930 286 aaKnown RBP20.76■□□□□ 0.91
CMTM3-206ENST00000563672 DNTTP04053 509 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ZNF806P0C7X5 589 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ETFBP38117 255 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 MPLP40238 635 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 CREB5Q02930 508 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ELAVL3Q14576 367 aaKnown RBP20.76■□□□□ 0.91
CMTM3-206ENST00000563672 STK40Q8N2I9 435 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ARHGEF2Q92974 986 aaKnown RBP20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ZNF419Q96HQ0 510 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-206ENST00000563672 MAGEH1Q9H213 219 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 DHX35Q9H5Z1 703 aaKnown RBP20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ATP13A1Q9HD20 1204 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 IP6K2Q9UHH9 426 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 ANAPC7Q9UJX3 599 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 SCML1Q9UN30 329 aa20.76■□□□□ 0.91
CMTM3-206ENST00000563672 CXorf51AA0A1B0GTR3 108 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 K7ERQ8 282 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 CBX4O00257 560 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 H2AFZP0C0S5 128 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 IL1R2P27930 398 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 ACVRL1P37023 503 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 CLCN6P51797 869 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 SLC20A2Q08357 652 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 CST6Q15828 149 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 ACCSLQ4AC99 568 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 DAB2IPQ5VWQ8 1189 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 H2AFVQ71UI9 128 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 SLC41A1Q8IVJ1 513 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 DEFB119Q8N690 84 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 ATP11CQ8NB49 1132 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 CTNNBL1Q8WYA6 563 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-206ENST00000563672 BTBD6Q96KE9 485 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 KCTD15Q96SI1 283 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-206ENST00000563672 NOL6Q9H6R4 1146 aaKnown RBP20.75■□□□□ 0.91
CMTM3-206ENST00000563672 CATSPERBQ9H7T0 1116 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 VPS45Q9NRW7 570 aa20.75■□□□□ 0.91
CMTM3-206ENST00000563672 MYO1FO00160 1098 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 FGF10O15520 208 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-206ENST00000563672 SMAD6O43541 496 aaKnown RBP20.74■□□□□ 0.91
CMTM3-206ENST00000563672 RAMP2O60895 175 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 NDUFS2O75306 463 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 TCF4P15884 667 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 TPI1P60174 286 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 ARF5P84085 180 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 ZNF33AQ06730 810 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 CCDC6Q16204 474 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 BOLA3Q53S33 107 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 LYSMD4Q5XG99 296 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 IL31Q6EBC2 164 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 RETSATQ6NUM9 610 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 LINGO4Q6UY18 593 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 ARMCX6Q7L4S7 300 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 CYP2U1Q7Z449 544 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 MMAAQ8IVH4 418 aaKnown RBP20.74■□□□□ 0.91
CMTM3-206ENST00000563672 CADM4Q8NFZ8 388 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 ZNF564Q8TBZ8 553 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-206ENST00000563672 PABPC3Q9H361 631 aaKnown RBP20.74■□□□□ 0.91
CMTM3-206ENST00000563672 SPTLC3Q9NUV7 552 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 UVRAGQ9P2Y5 699 aa20.74■□□□□ 0.91
CMTM3-206ENST00000563672 GON4LQ3T8J9 2241 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 CEP250Q9BV73 2442 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 MID1O15344 667 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 FOXD2O60548 495 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-206ENST00000563672 CD160O95971 181 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 TMEM253P0C7T8 217 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 ITPKAP23677 461 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 POLD3Q15054 466 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-206ENST00000563672 TTC31Q49AM3 519 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-206ENST00000563672 PRR23CQ6ZRP0 262 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 Q6ZVU0 165 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 USP30Q70CQ3 517 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 FAM124AQ86V42 546 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 UMODL1-AS1Q8N2C9 162 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 FOXJ1Q92949 421 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 GPR174Q9BXC1 333 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 TMEM74BQ9NUR3 256 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 CTTNBP2NLQ9P2B4 639 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 THADAQ6YHU6 1953 aa20.73■□□□□ 0.91
CMTM3-206ENST00000563672 EEF2KO00418 725 aaKnown RBP20.72■□□□□ 0.91
CMTM3-206ENST00000563672 MCF2LO15068 1137 aa20.72■□□□□ 0.91
CMTM3-206ENST00000563672 ALOX15BO15296 676 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms