RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 UAP1Q16222 522 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 MS4A13Q5J8X5 152 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 RABGAP1LQ5R372 815 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ANKRD20A2Q5SQ80 823 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ANKRD20A1Q5TYW2 823 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 TTC39BQ5VTQ0 682 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ANKRD20A3Q5VUR7 823 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 C16orf46Q6P387 395 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 DNAJB7Q7Z6W7 309 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 CHSY1Q86X52 802 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 CCDC13Q8IYE1 715 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 MRPL43Q8N983 215 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 LEMD2Q8NC56 503 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 MCUQ8NE86 351 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ZDHHC1Q8WTX9 485 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 AUTS2Q8WXX7 1259 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 MRPS31Q92665 395 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 DPF3Q92784 378 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 FATE1Q969F0 183 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 LRRC39Q96DD0 335 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 P2RY11Q96G91 374 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 TSGA13Q96PP4 275 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 KLHL5Q96PQ7 755 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ROPN1BQ9BZX4 212 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ROPN1Q9HAT0 212 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 XAB2Q9HCS7 855 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 TMEM248Q9NWD8 314 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 XPO7Q9UIA9 1087 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ZMYM5Q9UJ78 669 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 NEU3Q9UQ49 428 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 DNMT3AQ9Y6K1 912 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 TYW5A2RUC4 315 aaKnown RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 ARHGAP42A6NI28 874 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 HMGB1P1B2RPK0 211 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 AXIN1O15169 862 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 PSMD3O43242 534 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 COCHO43405 550 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 ACSL4O60488 711 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 MLNP12872 115 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 BMP1P13497 986 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 ETS1P14921 441 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 ATP5DP30049 168 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 HOXA9P31269 272 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 MAGEA4P43358 317 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 LMAN1P49257 510 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 YBEYP58557 167 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 AUHQ13825 339 aaKnown RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 LAPTM4AQ15012 233 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 PARP6Q2NL67 630 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 PARP15Q460N3 678 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 DNAJC21Q5F1R6 531 aaKnown RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 PPM1LQ5SGD2 360 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 CEP85LQ5SZL2 805 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 PIK3R6Q5UE93 754 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 UMODL1-AS1Q8N2C9 162 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 ATP11CQ8NB49 1132 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 KREMEN2Q8NCW0 462 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 CCDC110Q8TBZ0 833 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 NSMCE1Q8WV22 266 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 POF1BQ8WVV4 589 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 RPRD1AQ96P16 312 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 LGMNQ99538 433 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 TMEM109Q9BVC6 243 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 MAGEB5Q9BZ81 275 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 SEMA4AQ9H3S1 761 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 KLHL8Q9P2G9 620 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 IGSF9Q9P2J2 1179 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 VANGL2Q9ULK5 521 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 ZMYND8Q9ULU4 1186 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 PCDHA11Q9Y5I1 949 aa9.93□□□□□ -0.82
UBFD1-202ENST00000563366 NYNRINQ9P2P1 1898 aaKnown RBP9.93□□□□□ -0.82
UBFD1-202ENST00000563366 A0A087WUV0 522 aaPredicted RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 LCHNA4D1U4 455 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 C2orf71A6NGG8 1288 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 DRGXA6NNA5 263 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 E7ESA3 106 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 AGPSO00116 658 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 ICMTO60725 284 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 NEBLO76041 1014 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 MAP3K6O95382 1288 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 OLFM2O95897 454 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 TBX18O95935 607 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 APRTP07741 180 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 GSTA2P09210 222 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 HNRNPA1P09651 372 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 VAV1P15498 845 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 DDX6P26196 483 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 CHKAP35790 457 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 ETFBP38117 255 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 IFI35P80217 286 aaPredicted RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 PDIA2Q13087 525 aaKnown RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 SLC29A2Q14542 456 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 PRPSAP1Q14558 356 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 STAT4Q14765 748 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 KRT71Q3SY84 523 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 C5orf22Q49AR2 442 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 CCDC38Q502W7 563 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 C4orf17Q53FE4 359 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms