RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 SH2D3CQ8N5H7 860 aa12.6□□□□□ -0.39
FANCA-210ENST00000563318 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
FANCA-210ENST00000563318 SIPA1Q96FS4 1042 aa12.6□□□□□ -0.39
FANCA-210ENST00000563318 RPL10LQ96L21 214 aaKnown RBP12.6□□□□□ -0.39
FANCA-210ENST00000563318 PACSIN1Q9BY11 444 aa12.6□□□□□ -0.39
FANCA-210ENST00000563318 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.39
FANCA-210ENST00000563318 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
FANCA-210ENST00000563318 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 ZNF806P0C7X5 589 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 HTR7P34969 479 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 NUMBP49757 651 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 ZNF75DP51815 510 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 ARF5P84085 180 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 SLC25A11Q02978 314 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 GNA12Q03113 381 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 ACAP1Q15027 740 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 CCDC122Q5T0U0 273 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 DAB2IPQ5VWQ8 1189 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 RTL3Q8N8U3 475 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 OR7D4Q8NG98 312 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 FAM71BQ8TC56 605 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 ARHGEF2Q92974 986 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 ZNF419Q96HQ0 510 aaPredicted RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 SPACA7Q96KW9 195 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 SNRNP25Q9BV90 132 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
FANCA-210ENST00000563318 SEMA4GQ9NTN9 838 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 NCDNQ9UBB6 729 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 VPS28Q9UK41 221 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 RAB23Q9ULC3 237 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
FANCA-210ENST00000563318 K7ERQ8 282 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 SMAD6O43541 496 aaKnown RBP12.58□□□□□ -0.4
FANCA-210ENST00000563318 CD6P30203 668 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 OR1E1P30953 314 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 ACVRL1P37023 503 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 MPLP40238 635 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 ST8SIA6P61647 398 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
FANCA-210ENST00000563318 TCEAL1Q15170 157 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 ELF2Q15723 593 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 DPYSL2Q16555 572 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 AFMIDQ63HM1 303 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 KIAA1324Q6UXG2 1013 aaKnown RBP12.58□□□□□ -0.4
FANCA-210ENST00000563318 SLC36A4Q6YBV0 504 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
FANCA-210ENST00000563318 C1orf216Q8TAB5 229 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
FANCA-210ENST00000563318 PPP1R9BQ96SB3 815 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
FANCA-210ENST00000563318 ORAI3Q9BRQ5 295 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
FANCA-210ENST00000563318 NUP85Q9BW27 656 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 ARRDC1-AS1Q9H2J1 176 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 LRRC19Q9H756 370 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 MYO1AQ9UBC5 1043 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 SERGEFQ9UGK8 458 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 AP4E1Q9UPM8 1137 aa12.58□□□□□ -0.4
FANCA-210ENST00000563318 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 AKR1B15C9JRZ8 316 aaPredicted RBP12.57□□□□□ -0.4
FANCA-210ENST00000563318 RNF103O00237 685 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 ALOX15BO15296 676 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 MTA2O94776 668 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 LCA5LO95447 670 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 CTSLP07711 333 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 TMEM253P0C7T8 217 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 HOXD12P35452 270 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 DRD3P35462 400 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 HCAR3P49019 387 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 SERPINH1P50454 418 aaKnown RBP12.57□□□□□ -0.4
FANCA-210ENST00000563318 ARSEP51690 589 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 DPYSQ14117 519 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 DLG2Q15700 870 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 CST6Q15828 149 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 ZNF776Q68DI1 518 aaPredicted RBP12.57□□□□□ -0.4
FANCA-210ENST00000563318 SCYL2Q6P3W7 929 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 USP30Q70CQ3 517 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 LPCAT2Q7L5N7 544 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 CPNE8Q86YQ8 564 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 ARHGAP12Q8IWW6 846 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 TMEFF1Q8IYR6 380 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 STK40Q8N2I9 435 aa12.57□□□□□ -0.4
FANCA-210ENST00000563318 PGBD3Q8N328 593 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms