RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TMEM160Q9NX00 188 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC13A4Q9UKG4 626 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 DTX4Q9Y2E6 619 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 PKP3Q9Y446 797 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC22A23A1A5C7 686 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 VWA3AA6NCI4 1184 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 NPIPB13A6NJU9 1138 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 C2CD4BA6NLJ0 364 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 NPIPB5A8MRT5 1133 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 B4E171 279 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 KCNJ18B7U540 433 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 NPIPB4C9JG80 1138 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 PPEF2O14830 753 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 IKBKBO14920 756 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 BAIAP3O94812 1187 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 TOP3BO95985 862 aaKnown RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 TNNT1P13805 278 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 HOXB9P17482 250 aaPredicted RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 TSPAN7P41732 249 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 GHRHRQ02643 423 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 ANKRD1Q15327 319 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 TSTQ16762 297 aaKnown RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC9C1Q4G0N8 1177 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 KIAA1755Q5JYT7 1200 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 CBWD5Q5RIA9 395 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 LIPMQ5VYY2 423 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 CFAP161Q6P656 301 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC22A25Q6T423 547 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 C4orf50Q6ZRC1 276 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 ARL14EPQ8N8R7 260 aaPredicted RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 CCDC89Q8N998 374 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 ANKRD52Q8NB46 1076 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 WIPF2Q8TF74 440 aaPredicted RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 PPP1R10Q96QC0 940 aaKnown RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 SIGLEC11Q96RL6 698 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 REEP2Q9BRK0 252 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 KRTAP1-5Q9BYS1 174 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 CLPBQ9H078 707 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 TTYH1Q9H313 450 aaPredicted RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 PLEKHA5Q9HAU0 1116 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 PREBQ9HCU5 417 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 TLR8Q9NR97 1041 aaKnown RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 KRT84Q9NSB2 600 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 KLHL13Q9P2N7 655 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 ORC3Q9UBD5 711 aaPredicted RBP3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 NRBP1Q9UHY1 535 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 CAMK2AQ9UQM7 478 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 CNPY2Q9Y2B0 182 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 RABGAP1Q9Y3P9 1069 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 RPS6KL1Q9Y6S9 549 aa3.56□□□□□ -1.84
SHCBP1-202ENST00000563219 ZNF335Q9H4Z2 1342 aaPredicted RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 E5RJQ4 531 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 TSPAN3O60637 253 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 CNOT3O75175 753 aaKnown RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 METTL18O95568 372 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 WNT1P04628 370 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 CTSAP10619 480 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 LYL1P12980 280 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 PKMP14618 531 aaKnown RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ARSAP15289 507 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ABCD3P28288 659 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 PGM1P36871 562 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 MVDP53602 400 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 OAZ1P54368 228 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 RPS13P62277 151 aaKnown RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 STIM1Q13586 685 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ALKBH1Q13686 389 aaKnown RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 PDE1CQ14123 709 aaPredicted RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 KCTD2Q14681 263 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 NFIL3Q16649 462 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 FAM69AQ5T7M9 428 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 VWA5B1Q5TIE3 1220 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ACAD10Q6JQN1 1059 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 DENND1BQ6P3S1 775 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC2A7Q6PXP3 512 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 FAM57BQ71RH2 274 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 TMEM200AQ86VY9 491 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 SCN4BQ8IWT1 228 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ANKRD44Q8N8A2 993 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 FAM110DQ8TAY7 271 aaPredicted RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ZBTB10Q96DT7 871 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 RNF125Q96EQ8 232 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 CLMNQ96JQ2 1002 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 ADAD1Q96M93 576 aaKnown RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 MPHOSPH8Q99549 860 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 SDF4Q9BRK5 362 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 TMEM79Q9BSE2 394 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 PIMREGQ9BSJ6 248 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 HDHD5Q9BXW7 423 aa3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 MOV10Q9HCE1 1003 aaKnown RBP3.55□□□□□ -1.84
SHCBP1-202ENST00000563219 FSD2A1L4K1 749 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 KCNU1A8MYU2 1149 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 ANP32CO43423 234 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 FIBPO43427 364 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 AVPR2P30518 371 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 STAT1P42224 750 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 MMP13P45452 471 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 RPS6KA3P51812 740 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 RPP30P78346 268 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms