RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 C1RP00736 705 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 PYGLP06737 847 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
CHD9-205ENST00000562785 RXRAP19793 462 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 CCT4P50991 539 aaKnown RBP6.22□□□□□ -1.41
CHD9-205ENST00000562785 TAS2R50P59544 299 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 RNASELQ05823 741 aaKnown RBP6.22□□□□□ -1.41
CHD9-205ENST00000562785 PDCLQ13371 301 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 ERCC6LQ2NKX8 1250 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 ZNF772Q68DY9 489 aaPredicted RBP6.22□□□□□ -1.41
CHD9-205ENST00000562785 WDR93Q6P2C0 686 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 TRIM72Q6ZMU5 477 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 PAF1Q8N7H5 531 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 CAGE1Q8TC20 777 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 REPS1Q96D71 796 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 KTI12Q96EK9 354 aaPredicted RBP6.22□□□□□ -1.41
CHD9-205ENST00000562785 DAZAP1Q96EP5 407 aaKnown RBP6.22□□□□□ -1.41
CHD9-205ENST00000562785 ELOVL1Q9BW60 279 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 GGA3Q9NZ52 723 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 PI4KBQ9UBF8 816 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 BAG5Q9UL15 447 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 VPS4AQ9UN37 437 aa6.22□□□□□ -1.41
CHD9-205ENST00000562785 RREB1Q92766 1687 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3DA0A087WVF3 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3IA0A087WXS9 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3EA0A087X179 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3KA0A087X1G2 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3BA6NDS4 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3FA6NER0 549 aaPredicted RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3LB9A6J9 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 SH3BP5O60239 455 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 EXOC3O60645 756 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 CNPP09543 421 aaKnown RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3HP0C7X1 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 IGFBP2P18065 325 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 CNTFP26441 200 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 HMGB2P26583 209 aaKnown RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 ACVRL1P37023 503 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 RBM5P52756 815 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHD9-205ENST00000562785 WDR5P61964 334 aaKnown RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 TLE2Q04725 743 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 LARS2Q15031 903 aaKnown RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 MAP3K21Q5TCX8 1036 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 C20orf194Q5TEA3 1177 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3GQ6DHY5 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3CQ6IPX1 549 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 PCSK4Q6UW60 755 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 KYAT3Q6YP21 454 aaKnown RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 BBS12Q6ZW61 710 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 CENPQQ7L2Z9 268 aaPredicted RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 MRGPRGQ86SM5 289 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TMTC1Q8IUR5 882 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 LAS2Q8IYD9 372 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TBC1D3Q8IZP1 549 aaPredicted RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 PTGR2Q8N8N7 351 aaPredicted RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 EXOC6Q8TAG9 804 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 AKAP1Q92667 903 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHD9-205ENST00000562785 PIGSQ96S52 555 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 NPAS1Q99742 590 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 DUSP26Q9BV47 211 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 TEX13AQ9BXU3 409 aaPredicted RBP6.21□□□□□ -1.42
CHD9-205ENST00000562785 NOD2Q9HC29 1040 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 HYPKQ9NX55 129 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 MIS18AQ9NYP9 233 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 ANAPC4Q9UJX5 808 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 ADAM21Q9UKJ8 722 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 SLC12A4Q9UP95 1085 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 ARFGEF2Q9Y6D5 1785 aa6.21□□□□□ -1.42
CHD9-205ENST00000562785 COL5A3P25940 1745 aaPredicted RBP6.2□□□□□ -1.42
CHD9-205ENST00000562785 NUP188Q5SRE5 1749 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 AGAP5A6NIR3 686 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 EYA2O00167 538 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 HNRNPRO43390 633 aaKnown RBP6.2□□□□□ -1.42
CHD9-205ENST00000562785 RAMP2O60895 175 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 JTBO76095 146 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 ALDOAP04075 364 aaKnown RBP6.2□□□□□ -1.42
CHD9-205ENST00000562785 POLBP06746 335 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 ATF7P17544 494 aaPredicted RBP6.2□□□□□ -1.42
CHD9-205ENST00000562785 NDUFS1P28331 727 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 CCR5P51681 352 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 RCAN1P53805 252 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 ZXDAP98168 799 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 HOXA4Q00056 320 aaPredicted RBP6.2□□□□□ -1.42
CHD9-205ENST00000562785 UBE3AQ05086 875 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 SLC12A1Q13621 1099 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 MFSD13AQ14CX5 517 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 KRT24Q2M2I5 525 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 CTXN3Q4LDR2 81 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 JAKMIP3Q5VZ66 844 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 DCDC5Q6ZRR9 648 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 GGNQ86UU5 652 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 SARAFQ96BY9 339 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 HIC2Q96JB3 615 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 HS6ST2Q96MM7 605 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 EIF2AK1Q9BQI3 630 aaKnown RBP6.2□□□□□ -1.42
CHD9-205ENST00000562785 ADGRE3Q9BY15 652 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 UBA5Q9GZZ9 404 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 WASH6PQ9NQA3 447 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 TLK1Q9UKI8 766 aa6.2□□□□□ -1.42
CHD9-205ENST00000562785 RCE1Q9Y256 329 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms