RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 C16orf46Q6P387 395 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 IGFN1Q86VF2 1251 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 NKD2Q969F2 451 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 KLHL32Q96NJ5 620 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 MRPL4Q9BYD3 311 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 FRMD8Q9BZ67 464 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 CNOT11Q9UKZ1 510 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 PCDHB2Q9Y5E7 798 aa14.3□□□□□ -0.12
GTF3C1-203ENST00000562609 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 CFLARO15519 480 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 CSPG5O95196 566 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 NSFP46459 744 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC1A6P48664 564 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 TEDDM1Q5T9Z0 273 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 IER5Q5VY09 327 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 GALNT18Q6P9A2 607 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 ARCQ7LC44 396 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 PDCD6IPQ8WUM4 868 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 USP13Q92995 863 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 CFAP36Q96G28 342 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 TMEM134Q9H6X4 195 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 BCAP29Q9UHQ4 241 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 TTLL3Q9Y4R7 772 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 CROCCQ5TZA2 2017 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 A6NL46 340 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 ZBTB14O43829 449 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 ENDOUP21128 410 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 ADORA2AP29274 412 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 RPL22P35268 128 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 ADCYAP1R1P41586 468 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 DYNLT1P63172 113 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 BASP1P80723 227 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 E2F2Q14209 437 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 ZNF786Q8N393 782 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 USP33Q8TEY7 942 aa14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 PRPF19Q9UMS4 504 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-203ENST00000562609 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 CXorf49A8MYA2 514 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 PDHXO00330 501 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ERBB2P04626 1255 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 INSRRP14616 1297 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 RPL10AP62906 217 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 KLF10Q13118 480 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 NME3Q13232 169 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ORC1Q13415 861 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TTLL4Q14679 1199 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 OXA1LQ15070 435 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 SPOCD1Q6ZMY3 1216 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 BNC2Q6ZN30 1099 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TMCO5AQ8N6Q1 288 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 LENG8Q96PV6 779 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 CPQQ9Y646 472 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 CHEK2O96017 543 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 APOEP02649 317 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 VTNP04004 478 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 KRT19P08727 400 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TSHRP16473 764 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 MAPK10P53779 464 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 PMS2P3Q13401 168 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 GPR162Q16538 588 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ZBTB8OSQ8IWT0 167 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 UBR7Q8N806 425 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ZNF420Q8TAQ5 688 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ZSCAN18Q8TBC5 510 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 FAM167AQ96KS9 214 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 MROH8Q9H579 483 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 PRELID1Q9Y255 219 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 B3GNT3Q9Y2A9 372 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TRIM64CA6NLI5 447 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TLR3O15455 904 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 KRT75O95678 551 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 CXCL8P10145 99 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 MYL4P12829 197 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 DCKP27707 260 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TRPC1P48995 793 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ADAM17P78536 824 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 CEACAM7Q14002 265 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 LSM12Q3MHD2 195 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 PERM1Q5SV97 790 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ENOSF1Q7L5Y1 443 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 PTAR1Q7Z6K3 402 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TTC30AQ86WT1 665 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 BRSK2Q8IWQ3 736 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ZC3H7AQ8IWR0 971 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 DSELQ8IZU8 1212 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 SIX5Q8N196 739 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ACDQ96AP0 544 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC29A1Q99808 456 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 NPLQ9BXD5 320 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 TDRD1Q9BXT4 1180 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 MRPL46Q9H2W6 279 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 GINS2Q9Y248 185 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 ITM2BQ9Y287 266 aa14.28□□□□□ -0.12
GTF3C1-203ENST00000562609 AVILO75366 819 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 MYO1DO94832 1006 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms