RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 COPEO14579 308 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 PER2O15055 1255 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 DCTN3O75935 186 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 ATP5HO75947 161 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 C1QAP02745 245 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 SOD2P04179 222 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 TROVE2P10155 538 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCAT1-202ENST00000561978 SF3A3Q12874 501 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCAT1-202ENST00000561978 C11orf91Q3C1V1 193 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 FAM171A1Q5VUB5 890 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 BSPRYQ5W0U4 402 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 STEAP4Q687X5 459 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 OVOS1Q6IE37 1185 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 CGB2Q6NT52 195 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 SH2D5Q6ZV89 423 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 PID1Q7Z2X4 250 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 CACTIN-AS1Q8N1I8 211 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 TTC17Q96AE7 1141 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 VAT1Q99536 393 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 RTP3Q9BQQ7 232 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 ZBP1Q9H171 429 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 ABCF3Q9NUQ8 709 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 MKS1Q9NXB0 559 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 MOCS1Q9NZB8 636 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 TRHDEQ9UKU6 1024 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 GRID1Q9ULK0 1009 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 MFHAS1Q9Y4C4 1052 aa11.88□□□□□ -0.51
PCAT1-202ENST00000561978 CCDC189A1A4V9 331 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 CARNS1A5YM72 827 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ERI2A8K979 691 aaKnown RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 TRIM49D1C9J1S8 452 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 GOLGA8RI6L899 631 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 AP3B1O00203 1094 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 RASSF9O75901 435 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 PIAS1O75925 651 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 EFEMP2O95967 443 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 DHRS4L1P0CG22 281 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 BDNFP23560 247 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ADRA1DP25100 572 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 HTR7P34969 479 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 SKIV2L2P42285 1042 aaKnown RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 NEK3P51956 506 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ZNF33AQ06730 810 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 PPIDQ08752 370 aaKnown RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 WASHC5Q12768 1159 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 BNIP1Q12981 228 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 FAM133BQ5BKY9 247 aaKnown RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 RTP2Q5QGT7 225 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 FBXW10Q5XX13 1052 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 KIAA1841Q6NSI8 718 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ZNF449Q6P9G9 518 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 RNF168Q8IYW5 571 aaPredicted RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ZNF567Q8N184 647 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 SNRNP27Q8WVK2 155 aaKnown RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 SERAC1Q96JX3 654 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 OSBPL2Q9H1P3 480 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 SLC40A1Q9NP59 571 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 SEPT10Q9P0V9 454 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 KLHL8Q9P2G9 620 aaPredicted RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 OR12D3Q9UGF7 316 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 UBOX5O94941 541 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 CXCL14O95715 111 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 PGAM1P18669 254 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 POU3F3P20264 500 aaPredicted RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 PAX7P23759 505 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 CACNA2D1P54289 1103 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 COG7P83436 770 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 SPRED3Q2MJR0 410 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 USP41Q3LFD5 358 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 TCEAL5Q5H9L2 206 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ITPRIPL1Q6GPH6 555 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 CASC4Q6P4E1 433 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 TIFABQ6ZNK6 161 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 BHLHA9Q7RTU4 235 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 CCDC33Q8N5R6 958 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ADAM32Q8TC27 787 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 RNF34Q969K3 372 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 HDAC11Q96DB2 347 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
PCAT1-202ENST00000561978 PKMYT1Q99640 499 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 TKTL2Q9H0I9 626 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 IGFLR1Q9H665 355 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 PLAC1Q9HBJ0 212 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 TMPRSS4Q9NRS4 437 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 ABCC13Q9NSE7 274 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 KLC4Q9NSK0 619 aa11.87□□□□□ -0.51
PCAT1-202ENST00000561978 C2orf71A6NGG8 1288 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 CXorf49A8MYA2 514 aaPredicted RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 PSMD3O43242 534 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 URODP06132 367 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 CTSAP10619 480 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms