RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 OVCA2Q8WZ82 227 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 MAML1Q92585 1016 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 HDAC11Q96DB2 347 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 MYEOVQ96EZ4 313 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TRMT2BQ96GJ1 504 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF419Q96HQ0 510 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TTC25Q96NG3 672 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 SERPINB12Q96P63 405 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 RUFY1Q96T51 708 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 SEPT5Q99719 369 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 DHRS4Q9BTZ2 278 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 BRD8Q9H0E9 1235 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ZBP1Q9H171 429 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 EIF2B3Q9NR50 452 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TLR8Q9NR97 1041 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 RAB6BQ9NRW1 208 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 OLA1Q9NTK5 396 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 CXXC1Q9P0U4 656 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 FNIP2Q9P278 1114 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 IGSF9Q9P2J2 1179 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 LGALS13Q9UHV8 139 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 SLC12A6Q9UHW9 1150 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 YIPF1Q9Y548 306 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 TEX264Q9Y6I9 313 aa6.7□□□□□ -1.34
CAPN3-210ENST00000561817 NYNRINQ9P2P1 1898 aaKnown RBP6.7□□□□□ -1.34
CAPN3-210ENST00000561817 CHD5Q8TDI0 1954 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 MYO18AQ92614 2054 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 PLXNA4Q9HCM2 1894 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 E9PAM4 449 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA8MH3BSY2 632 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 RASGRF2O14827 1237 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 NCAM2O15394 837 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 FGF10O15520 208 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 TLR5O60602 858 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF189O75820 626 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 SUN1O94901 812 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 CSPG5O95196 566 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 PEX11BO96011 259 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 CTSAP10619 480 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 SLC2A3P11169 496 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 EPHB2P29323 1055 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 FDFT1P37268 417 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 GARSP41250 739 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 GRIA1P42261 906 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 BASP1P80723 227 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 PDIA2Q13087 525 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 ZBTB17Q13105 803 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 STAT4Q14765 748 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 PARP6Q2NL67 630 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 MS4A13Q5J8X5 152 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 RNFT1Q5M7Z0 435 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 KCTD11Q693B1 232 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 HEATR6Q6AI08 1181 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 NADSYN1Q6IA69 706 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 LILRA6Q6PI73 481 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 KLHDC10Q6PID8 442 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 ARHGAP36Q6ZRI8 547 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 PDZD4Q76G19 769 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 CROCCP2Q86T23 111 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 TCEAL8Q8IYN2 117 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 VPS52Q8N1B4 723 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 UMODL1-AS1Q8N2C9 162 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 CNTD1Q8N815 330 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 RTL3Q8N8U3 475 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 FAM76AQ8TAV0 307 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 DEPDC1BQ8WUY9 529 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 AUTS2Q8WXX7 1259 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 HERVK_113Q902F9 699 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 FATE1Q969F0 183 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 TBC1D31Q96DN5 1066 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 TMEM169Q96HH4 297 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 SIGLEC10Q96LC7 697 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 IL12RB2Q99665 862 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 GDF15Q99988 308 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 LRRC3Q9BY71 257 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 FRMD8Q9BZ67 464 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 SLC39A8Q9C0K1 460 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 SIK2Q9H0K1 926 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 MARCH2Q9P0N8 246 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 PPARGC1AQ9UBK2 798 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 FETUBQ9UGM5 382 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 MAFFQ9ULX9 164 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 HBS1LQ9Y450 684 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.69□□□□□ -1.34
CAPN3-210ENST00000561817 SLC4A7Q9Y6M7 1214 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 ATG2AQ2TAZ0 1938 aa6.69□□□□□ -1.34
CAPN3-210ENST00000561817 OBSL1O75147 1896 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 A0A087WUV0 522 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SLC12A8A0AV02 714 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 GRXCR1A8MXD5 290 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 E7EVH7 732 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 H3BNC9 293 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 KCNK1O00180 336 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 GFRA2O00451 464 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 C2CD2LO14523 706 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TEX28O15482 410 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms