RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 LINC01599Q8WXQ3 324 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OVCA2Q8WZ82 227 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SHC3Q92529 594 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZKSCAN4Q969J2 545 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 TEKT1Q969V4 418 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LENG1Q96BZ8 264 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 MIEF2Q96C03 454 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SLC7A6OSQ96CW6 309 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 TMCO6Q96DC7 493 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ERLEC1Q96DZ1 483 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ELP4Q96EB1 424 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 RNFT2Q96EX2 444 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZDHHC12Q96GR4 267 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ERO1AQ96HE7 468 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CLMNQ96JQ2 1002 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZBTB45Q96K62 511 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 HS6ST2Q96MM7 605 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZNF558Q96NG5 402 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CAMK1GQ96NX5 476 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 DACH2Q96NX9 599 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TRIB1Q96RU8 372 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 DCLRE1CQ96SD1 692 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 MAP7D2Q96T17 732 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PAFAH2Q99487 392 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MYOCQ99972 504 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MESP1Q9BRJ9 268 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 H2AFJQ9BTM1 129 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 NDC1Q9BTX1 674 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TUBB6Q9BUF5 446 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PTDSS2Q9BVG9 487 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PHF7Q9BWX1 381 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 C1QTNF1Q9BXJ1 281 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 WDR11Q9BZH6 1224 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CTDSP1Q9GZU7 261 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD2Q9GZV1 360 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 RIBC2Q9H4K1 309 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 EPHX3Q9H6B9 360 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TASP1Q9H6P5 420 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 NRDE2Q9H7Z3 1164 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 AKIRIN1Q9H9L7 192 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 LIN28AQ9H9Z2 209 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 GBA2Q9HCG7 927 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 PPANQ9NQ55 473 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 FSCN3Q9NQT6 498 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SEMA3GQ9NS98 782 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SIRT3Q9NTG7 399 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SPATS2LQ9NUQ6 558 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZNHIT6Q9NWK9 470 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 TAS2R3Q9NYW6 316 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SEPT10Q9P0V9 454 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 VPS18Q9P253 973 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 C5AR2Q9P296 337 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 GMPR2Q9P2T1 348 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 DNMT3BQ9UBC3 853 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 RBPJLQ9UBG7 517 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 DDX25Q9UHL0 483 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SLCO3A1Q9UIG8 710 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LEF1Q9UJU2 399 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 CCNL1Q9UK58 526 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 FBXW2Q9UKT8 454 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MKLN1Q9UL63 735 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SLC45A2Q9UMX9 530 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SNX6Q9UNH7 406 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 STX8Q9UNK0 236 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LIPT1Q9Y234 373 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PIN4Q9Y237 131 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZBTB1Q9Y2K1 713 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 RAXQ9Y2V3 346 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CAB39Q9Y376 341 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 ATAD2BQ9ULI0 1458 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 AOX1Q06278 1338 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 EDDM13A0A1B0GTR0 161 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 A0A1W2PRG0 241 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HMX2A2RU54 273 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CTAGE15A4D2H0 777 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HTR3EA5X5Y0 456 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 OOEPA6NGQ2 149 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 C3orf70A6NLC5 250 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 ANXA2P2A6NMY6 339 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 C2orf81A6NN90 581 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CXorf49A8MYA2 514 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 B5MCH6 92 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 USP17L23D6RBM5 183 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 FAM86B1E9PN63 330 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RBAK-RBAKDNI3L0D1 243 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 GRM8O00222 908 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 DNM1LO00429 736 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ABLIM1O14639 778 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 N4BP3O15049 544 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SCAMP1O15126 338 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 EIF3DO15371 548 aaKnown RBP eCLIP2.11□□□□□ -2.07
RTF1-207ENST00000561076 PJA2O43164 708 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SMPD2O60906 423 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SOCS5O75159 536 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TACC1O75410 805 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 BCAS2O75934 225 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 RAD17O75943 681 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms