RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CCAR2Q8N163 923 aaKnown RBP19.07■□□□□ 0.64
TPM1-226ENST00000560959 ALG14Q96F25 216 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 VCPIP1Q96JH7 1222 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 SLC46A1Q96NT5 459 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.07■□□□□ 0.64
TPM1-226ENST00000560959 NCKIPSDQ9NZQ3 722 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 SLC25A13Q9UJS0 675 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 NAV2Q8IVL1 2488 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 LY6G6EA0A0G2JKS1 128 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 TCAF2A6NFQ2 919 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 KCNU1A8MYU2 1149 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 ARHGAP6O43182 974 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 IGLV3-25P01717 112 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 ZNF18P17022 549 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 HNRNPA2B1P22626 353 aaKnown RBP19.06■□□□□ 0.64
TPM1-226ENST00000560959 AKT2P31751 481 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 HNRNPKP61978 463 aaKnown RBP eCLIP19.06■□□□□ 0.64
TPM1-226ENST00000560959 DLG2Q15700 870 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 ISXQ2M1V0 245 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 ACCSLQ4AC99 568 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 ZC3H12AQ5D1E8 599 aaKnown RBP19.06■□□□□ 0.64
TPM1-226ENST00000560959 DCAF17Q5H9S7 520 aaPredicted RBP19.06■□□□□ 0.64
TPM1-226ENST00000560959 SYPL2Q5VXT5 272 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 TAC4Q86UU9 113 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 HORMAD1Q86X24 394 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 ATP6V0D2Q8N8Y2 350 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 STK32AQ8WU08 396 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 FAM149B1Q96BN6 582 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 PRMT1Q99873 361 aaKnown RBP19.06■□□□□ 0.64
TPM1-226ENST00000560959 CA5BQ9Y2D0 317 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 PCDHB4Q9Y5E5 795 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 PCDHGA8Q9Y5G5 932 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 U3KQA8 63 aa19.06■□□□□ 0.64
TPM1-226ENST00000560959 RNF225M0QZC1 329 aaPredicted RBP19.05■□□□□ 0.64
TPM1-226ENST00000560959 SLC31A1O15431 190 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 FFAR2O15552 330 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 SLC2A3P11169 496 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 RBMS1P29558 406 aaKnown RBP19.05■□□□□ 0.64
TPM1-226ENST00000560959 MLLT3P42568 568 aaPredicted RBP19.05■□□□□ 0.64
TPM1-226ENST00000560959 GPD2P43304 727 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 FKBP3Q00688 224 aaKnown RBP19.05■□□□□ 0.64
TPM1-226ENST00000560959 MTA1Q13330 715 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 ZNF284Q2VY69 593 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 RABGAP1LQ5R372 815 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 PIP5KL1Q5T9C9 394 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 CXorf57Q6NSI4 855 aaKnown RBP19.05■□□□□ 0.64
TPM1-226ENST00000560959 ABI3BPQ7Z7G0 1075 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 TPCN2Q8NHX9 752 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 SLC35C1Q96A29 364 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 FEM1AQ9BSK4 669 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 POPDC2Q9HBU9 364 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 FARP1Q9Y4F1 1045 aaPredicted RBP19.05■□□□□ 0.64
TPM1-226ENST00000560959 HS3ST3A1Q9Y663 406 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 CSNK1G3Q9Y6M4 447 aa19.05■□□□□ 0.64
TPM1-226ENST00000560959 A0A1W2PQU0 124 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 K7ESM1 405 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 TRUB2O95900 331 aaKnown RBP19.04■□□□□ 0.64
TPM1-226ENST00000560959 NDUFA8P51970 172 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 LRMPQ12912 555 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 MEA1Q16626 185 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 POM121L1PQ3SYA9 428 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 COBLL1Q53SF7 1204 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 XKR5Q6UX68 686 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 KRBA2Q6ZNG9 492 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 TMIEQ8NEW7 156 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 OR13H1Q8NG92 308 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 MAPK15Q8TD08 544 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 MED15Q96RN5 788 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 SRRTQ9BXP5 876 aaKnown RBP19.04■□□□□ 0.64
TPM1-226ENST00000560959 GPR27Q9NS67 375 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 OR51B4Q9Y5P0 310 aa19.04■□□□□ 0.64
TPM1-226ENST00000560959 SPTA1P02549 2419 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 BRD2P25440 801 aaKnown RBP19.03■□□□□ 0.64
TPM1-226ENST00000560959 CSRP3P50461 194 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 YWHAZP63104 245 aaKnown RBP19.03■□□□□ 0.64
TPM1-226ENST00000560959 ZCCHC8Q6NZY4 707 aaKnown RBP19.03■□□□□ 0.64
TPM1-226ENST00000560959 Q6ZVU0 165 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 SLC22A18ASQ8N1D0 253 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 SH2D3CQ8N5H7 860 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 IFI44Q8TCB0 444 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 RNF34Q969K3 372 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 SNX21Q969T3 373 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 NT5C1BQ96P26 610 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 CALN1Q9BXU9 219 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 SLC4A5Q9BY07 1137 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 OSBPL2Q9H1P3 480 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 ARMCX3Q9UH62 379 aaPredicted RBP19.03■□□□□ 0.64
TPM1-226ENST00000560959 SATB2Q9UPW6 733 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 HS3ST2Q9Y278 367 aa19.03■□□□□ 0.64
TPM1-226ENST00000560959 CDRT15L2A8MXV6 281 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 SLC28A2O43868 658 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 TCEA3O75764 348 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 CSF2P04141 144 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 PRLRP16471 622 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 FBXL22Q6P050 247 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 TMEM110Q86TL2 294 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 PRR11Q96HE9 360 aaPredicted RBP19.02■□□□□ 0.64
TPM1-226ENST00000560959 CCDC114Q96M63 670 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 TSG101Q99816 390 aa19.02■□□□□ 0.64
TPM1-226ENST00000560959 THAP9Q9H5L6 903 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms