RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 DNAI1Q9UI46 699 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 ANAPC7Q9UJX3 599 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 EIF3CLB5ME19 914 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 SMAD6O43541 496 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 CREB3O43889 395 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 PRPSAP2O60256 369 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 LRP3O75074 770 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF821O75541 412 aaPredicted RBP15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 TMEM253P0C7T8 217 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 FECHP22830 423 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 HTR7P34969 479 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 PTGER3P43115 390 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 KRT83P78385 493 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 ARF5P84085 180 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 ZBTB16Q05516 673 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 SPEM2Q0P670 501 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 DLG2Q15700 870 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 SPDYCQ5MJ68 293 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 PLA2G2CQ5R387 149 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 LINGO4Q6UY18 593 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC36A4Q6YBV0 504 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 CACUL1Q86Y37 369 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 TMEFF1Q8IYR6 380 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF564Q8TBZ8 553 aaPredicted RBP15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 EIF3CQ99613 913 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 EPAS1Q99814 870 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 SPON2Q9BUD6 331 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 KLC2Q9H0B6 622 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 MAGEH1Q9H213 219 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 ARRDC1-AS1Q9H2J1 176 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 DHX35Q9H5Z1 703 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 UVRAGQ9P2Y5 699 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 IP6K2Q9UHH9 426 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC25A13Q9UJS0 675 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 PCDHGA5Q9Y5G8 931 aa15.63■□□□□ 0.09
SNRPA1-213ENST00000560856 NUP205Q92621 2012 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 CXorf51AA0A1B0GTR3 108 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 BCLAF3A2AJT9 711 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 MYO1FO00160 1098 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 CD6P30203 668 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 NNMTP40261 264 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC25A11Q02978 314 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 BOLA3Q53S33 107 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF776Q68DI1 518 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 LPCAT2Q7L5N7 544 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC41A1Q8IVJ1 513 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 UMODL1-AS1Q8N2C9 162 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 CTNNBL1Q8WYA6 563 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 TOE1Q96GM8 510 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF419Q96HQ0 510 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 ATP13A1Q9HD20 1204 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 ACTL7AQ9Y615 435 aa15.62■□□□□ 0.09
SNRPA1-213ENST00000560856 RALGAPA1Q6GYQ0 2036 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 C10orf142B7Z368 130 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 CBX4O00257 560 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 MAP3K13O43283 966 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 RAMP2O60895 175 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 PROSCO94903 275 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 LCA5LO95447 670 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 RARAP10276 462 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 HCAR3P49019 387 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 TPI1P60174 286 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 RPL6Q02878 288 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC20A2Q08357 652 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 CST6Q15828 149 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 DPYSL2Q16555 572 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 KCNT1Q5JUK3 1230 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 Q6ZVU0 165 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 MMAAQ8IVH4 418 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 DEFB119Q8N690 84 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 TEKT4Q8WW24 435 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 PANX2Q96RD6 677 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 HINFPQ9BQA5 517 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 PABPC3Q9H361 631 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 CATSPERBQ9H7T0 1116 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 OSGEPQ9NPF4 335 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 SEMA4GQ9NTN9 838 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 CWC15Q9P013 229 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 CTTNBP2NLQ9P2B4 639 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 SERGEFQ9UGK8 458 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 SARDHQ9UL12 918 aa15.61■□□□□ 0.09
SNRPA1-213ENST00000560856 SPTBN4Q9H254 2564 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 TNRC6BQ9UPQ9 1833 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 RASA4BC9J798 803 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 EEF2KO00418 725 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 MCF2LO15068 1137 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 MID1O15344 667 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 FGF10O15520 208 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 RASA4O43374 803 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 KDELR3O43731 214 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 MTA2O94776 668 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF806P0C7X5 589 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ACADMP11310 421 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 GOT1P17174 413 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 OXTRP30559 389 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ACSL1P33121 698 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ETFBP38117 255 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 MPLP40238 635 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 DHPSP49366 369 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms