RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 BEST1O76090 585 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 ZRANB2O95218 330 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 TIMP1P01033 207 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 AMHP03971 560 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 KRT7P08729 469 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 NAT2P11245 290 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 BDNFP23560 247 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 SDC4P31431 198 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 L1CAMP32004 1257 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 SLC11A1P49279 550 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 MRPS25P82663 173 aaKnown RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 BRD3Q15059 726 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 LLGL1Q15334 1064 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 EFHC1Q5JVL4 640 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 FBXO38Q6PIJ6 1188 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 TMCO3Q6UWJ1 677 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 OLFML1Q6UWY5 402 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 C4orf50Q6ZRC1 276 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 PAQR9Q6ZVX9 377 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 CEP57Q86XR8 500 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 SLC13A5Q86YT5 568 aaPredicted RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 SPATA2LQ8IUW3 424 aaPredicted RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 LRRC56Q8IYG6 542 aaPredicted RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 RCOR2Q8IZ40 523 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 DCP1BQ8IZD4 617 aaKnown RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 LRRC43Q8N309 656 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 TMEM199Q8N511 208 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 EXD1Q8NHP7 514 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 MICAL1Q8TDZ2 1067 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 CLEC4CQ8WTT0 213 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 KCTD13Q8WZ19 329 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 RUBCNQ92622 972 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 FAM149B1Q96BN6 582 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 TMEM209Q96SK2 561 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 PNKPQ96T60 521 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 NCAPGQ9BPX3 1015 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 RTP3Q9BQQ7 232 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 TMEM175Q9BSA9 504 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 CNPY3Q9BT09 278 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 DDX47Q9H0S4 455 aaKnown RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 SLITRK6Q9H5Y7 841 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 PCSK1NQ9UHG2 260 aa8.13□□□□□ -1.11
LINC00520-206ENST00000560336 MBD1Q9UIS9 605 aaPredicted RBP8.13□□□□□ -1.11
LINC00520-206ENST00000560336 HTTP42858 3142 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SF3B1O75533 1304 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 ABHD14A-ACY1A0A1B0GW23 586 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 LRRD1A4D1F6 860 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 C2CD4BA6NLJ0 364 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 NT5C1B-RDH14C9J2C7 533 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SYN3O14994 580 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 RAD51CO43502 376 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 PRPSAP2O60256 369 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 PHF2O75151 1096 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 LRCH4O75427 683 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 DAB1O75553 588 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FBXO21O94952 628 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 HEXIM1O94992 359 aaKnown RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 TRUB2O95900 331 aaKnown RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 TCF4P15884 667 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 MIPP30301 263 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FLT3P36888 993 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 TKTL1P51854 596 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 RABGGTBP53611 331 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 VSNL1P62760 191 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 ELAVL2Q12926 359 aaKnown RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 TAF5Q15542 800 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 C15orf59Q2T9L4 293 aaPredicted RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 MAP9Q49MG5 647 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 CTXN3Q4LDR2 81 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 ATP13A4Q4VNC1 1196 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SLC39A12Q504Y0 691 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 LRRC38Q5VT99 294 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FAM171A1Q5VUB5 890 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 ZNF280DQ6N043 979 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SCYL2Q6P3W7 929 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FUT10Q6P4F1 479 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FAM171BQ6P995 826 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SPOCD1Q6ZMY3 1216 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SLC26A9Q7LBE3 791 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 MAATS1Q7Z4T9 603 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 POLNQ7Z5Q5 900 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 C1QL4Q86Z23 238 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 IFT20Q8IY31 132 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 OR10T2Q8NGX3 314 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FAM172AQ8WUF8 416 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 HSPH1Q92598 858 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 MAGOHBQ96A72 148 aaKnown RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 PIWIL1Q96J94 861 aaKnown RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 CFAP57Q96MR6 1250 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 RUNDC3BQ96NL0 473 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SLITRK1Q96PX8 696 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 SMOQ99835 787 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 HEMGNQ9BXL5 484 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 RHOBTB2Q9BYZ6 727 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 OSBPL8Q9BZF1 889 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 ULBP1Q9BZM6 244 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms