RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ZNF177Q13360 481 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 PIP5KL1Q5T9C9 394 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 FAM46CQ5VWP2 391 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 RBM44Q6ZP01 1051 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 ARL14Q8N4G2 192 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 WDR36Q8NI36 951 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 CLEC4CQ8WTT0 213 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 OR8D1Q8WZ84 308 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 SGF29Q96ES7 293 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 XPO7Q9UIA9 1087 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 PIK3R2O00459 728 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 CUTAO60888 179 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 F13A1P00488 732 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 LTFP02788 710 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ITGB2P05107 769 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 FYNP06241 537 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 FAM87AP0C7U9 286 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ZSCAN22P10073 491 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 PDGFRAP16234 1089 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 RGS7P49802 495 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 PDX1P52945 283 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ZNF284Q2VY69 593 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 KRT39Q6A163 491 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ZCCHC8Q6NZY4 707 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 CRTC1Q6UUV9 634 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 USP53Q70EK8 1073 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ABI3BPQ7Z7G0 1075 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 DSG4Q86SJ6 1040 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 HORMAD1Q86X24 394 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 LGI2Q8N0V4 545 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 IRGQQ8WZA9 623 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 SLC39A13Q96H72 371 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 GPR27Q9NS67 375 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 HESX1Q9UBX0 185 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 TRAF3IP3Q9Y228 551 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 LRRK1Q38SD2 2015 aa13.18□□□□□ -0.3
RABGGTA-213ENST00000560127 C1QTNF3-AMACRE9PGA6 284 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 O00370 1275 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 MCF2LO15068 1137 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 ALOX15BO15296 676 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 NOBOXO60393 691 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 TCEA3O75764 348 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 GJB6O95452 261 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 MOCS2O96007 188 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 ITGA2BP08514 1039 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 GP1BBP13224 206 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 KRT13P13646 458 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 CD19P15391 556 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 HNRNPA2B1P22626 353 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 AKT2P31751 481 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 PLK1P53350 603 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 HNRNPKP61978 463 aaKnown RBP eCLIP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 SULT2A1Q06520 285 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 ENPEPQ07075 957 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 DRAP1Q14919 205 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 TGIF1Q15583 401 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 RAP1GAP2Q684P5 730 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 PMF1Q6P1K2 205 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 NEK5Q6P3R8 708 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 Q6ZSR6 202 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 DQX1Q8TE96 717 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 SEMA3CQ99985 751 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 EXOC1Q9NV70 894 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 TLR6Q9Y2C9 796 aa13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-213ENST00000560127 DOCK4Q8N1I0 1966 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 SDK2Q58EX2 2172 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 CCDC187A0A096LP49 1063 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 ATP9BO43861 1147 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 CSF2P04141 144 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 NME1P15531 152 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 TACR2P21452 398 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 NR2F2P24468 414 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 GTF2H1P32780 548 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 TLE1Q04724 770 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 NNTQ13423 1086 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 FZD2Q14332 565 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 NFIL3Q16649 462 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 Q6ZVU0 165 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms