RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PRR11Q96HE9 360 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 SERPINB11Q96P15 392 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 SLC25A13Q9UJS0 675 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 MAPK8IP1Q9UQF2 711 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 PCDHGA8Q9Y5G5 932 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 CDRT15L2A8MXV6 281 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 F5H5T6 163 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 H3BM21 787 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 M0QYV0 167 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 O00370 1275 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 KPNA3O00505 521 aaPredicted RBP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 MUSKO15146 869 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 PCDH8O95206 1070 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 GJB6O95452 261 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 YEATS4O95619 227 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 APOEP02649 317 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 NTRK1P04629 796 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 FAM87AP0C7U9 286 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 VDRP11473 427 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 ME1P48163 572 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 TAS2R38P59533 333 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 HNRNPKP61978 463 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 SULT2A1Q06520 285 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 SRSF6Q13247 344 aaKnown RBP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 NR0B2Q15466 257 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 DEFB133Q30KQ1 61 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 ZCCHC8Q6NZY4 707 aaKnown RBP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 PMF1Q6P1K2 205 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 GCNT7Q6ZNI0 430 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 Q6ZSR6 202 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 TAC4Q86UU9 113 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 WDR36Q8NI36 951 aaKnown RBP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 FRS2Q8WU20 508 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 IRGQQ8WZA9 623 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 PAGE5Q96GU1 130 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 DYRK4Q9NR20 520 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 ANKMY1Q9P2S6 941 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 IPO11Q9UI26 975 aaKnown RBP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 ATXN7L1Q9ULK2 861 aaPredicted RBP11.09□□□□□ -0.63
TRAF3-207ENST00000559734 PPM1HQ9ULR3 514 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 NAALADL1Q9UQQ1 740 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 TLR6Q9Y2C9 796 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 SPTA1P02549 2419 aa11.09□□□□□ -0.63
TRAF3-207ENST00000559734 A6NNZ2 444 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 CASC3O15234 703 aaKnown RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 RPL13P26373 211 aaKnown RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 GTF2H1P32780 548 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 LRMPQ12912 555 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 ADAM9Q13443 819 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 CUL2Q13617 745 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 TGIF1Q15583 401 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 DLG2Q15700 870 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 ZC3H12AQ5D1E8 599 aaKnown RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 DCAF17Q5H9S7 520 aaPredicted RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 PERM1Q5SV97 790 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 PIP5KL1Q5T9C9 394 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 SEL1L3Q68CR1 1132 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 CCAR2Q8N163 923 aaKnown RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 SCML4Q8N228 414 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 LMX1AQ8TE12 382 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 ERCC4Q92889 916 aaPredicted RBP11.08□□□□□ -0.64
TRAF3-207ENST00000559734 GRAMD1AQ96CP6 724 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 SGF29Q96ES7 293 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 FAXDC2Q96IV6 333 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 STARD5Q9NSY2 213 aa11.08□□□□□ -0.64
TRAF3-207ENST00000559734 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 AGRPO00253 132 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 MCF2LO15068 1137 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 ALOX15BO15296 676 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 EFSO43281 561 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 SUV39H1O43463 412 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
TRAF3-207ENST00000559734 GABBR2O75899 941 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 TLE1Q04724 770 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 SLC12A1Q13621 1099 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 SPIDRQ14159 915 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 RESP18Q5W5W9 173 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 CLEC14AQ86T13 490 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 TPCN2Q8NHX9 752 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 GRIN3AQ8TCU5 1115 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 TFAP2BQ92481 460 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 CCDC47Q96A33 483 aaKnown RBP11.07□□□□□ -0.64
TRAF3-207ENST00000559734 IFT43Q96FT9 208 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 SLC39A13Q96H72 371 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
TRAF3-207ENST00000559734 IL12RB2Q99665 862 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 EPB41L5Q9HCM4 733 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 ST7Q9NRC1 585 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 NCKIPSDQ9NZQ3 722 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 VPS28Q9UK41 221 aa11.07□□□□□ -0.64
TRAF3-207ENST00000559734 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
TRAF3-207ENST00000559734 TDRD6O60522 2096 aaKnown RBP11.06□□□□□ -0.64
TRAF3-207ENST00000559734 SYNJ2BP-COX16A0A087WUM0 186 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms