RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 KLHL11Q9NVR0 708 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 TRIM10Q9UDY6 481 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 CCDC163A0A0D9SF12 145 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 CBX4O00257 560 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 AXIN1O15169 862 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 SYNCRIPO60506 623 aaKnown RBP20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 ALDH1A2O94788 518 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 YBEYP58557 167 aaPredicted RBP20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 HNRNPA1L2Q32P51 320 aaKnown RBP20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 IL31Q6EBC2 164 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 LINGO4Q6UY18 593 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 LONP2Q86WA8 852 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 KCTD6Q8NC69 237 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 FRS2Q8WU20 508 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 HMGB4Q8WW32 186 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 RAPGEF5Q92565 580 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 SLC6A17Q9H1V8 727 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 LRRC19Q9H756 370 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 ETNK2Q9NVF9 386 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 SLC25A13Q9UJS0 675 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 MFHAS1Q9Y4C4 1052 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 ARIH1Q9Y4X5 557 aaPredicted RBP20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 R4GN57 208 aa20.76■□□□□ 0.91
TSPAN3-207ENST00000559494 EML5Q05BV3 1969 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 RASA4BC9J798 803 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 K7ERQ8 282 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 DCLK1O15075 740 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 RASA4O43374 803 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 ATP9BO43861 1147 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 LILRB5O75023 590 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 CD160O95971 181 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 ETFBP38117 255 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 NNMTP40261 264 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 NDST2P52849 883 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 ARF5P84085 180 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 KIF5AQ12840 1032 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 DPYSL3Q14195 570 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 PDK2Q15119 407 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 C9orf64Q5T6V5 341 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 LRRC38Q5VT99 294 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 AFMIDQ63HM1 303 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 SH2D3CQ8N5H7 860 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 NETO2Q8NC67 525 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 PTPRN2Q92932 1015 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 HMCESQ96FZ2 354 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 CELF6Q96J87 481 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 PDLIM2Q96JY6 352 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 TPSD1Q9BZJ3 242 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 SLC39A8Q9C0K1 460 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 MKRN2Q9H000 416 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 DONSONQ9NYP3 566 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 HS3ST2Q9Y278 367 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 PCDHGA2Q9Y5H1 932 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 ACTL7AQ9Y615 435 aa20.75■□□□□ 0.91
TSPAN3-207ENST00000559494 HRO43593 1189 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 KDELR3O43731 214 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 SPOPO43791 374 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 SIN3BO75182 1162 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 SRCP12931 536 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 TNNT1P13805 278 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 VAV1P15498 845 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 NDUFV2P19404 249 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 KDELR1P24390 212 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 COPAP53621 1224 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 NAP1L1P55209 391 aaKnown RBP20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 SRSF5Q13243 272 aaKnown RBP20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 SERINC3Q13530 473 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 DLG2Q15700 870 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 C11orf63Q6NUN7 778 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 ARHGAP12Q8IWW6 846 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 PGBD3Q8N328 593 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 NPWQ8N729 165 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 ANP32BQ92688 251 aaKnown RBP20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 CALR3Q96L12 384 aaKnown RBP20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 MRGPRX1Q96LB2 322 aa20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 RCOR3Q9P2K3 495 aaPredicted RBP20.74■□□□□ 0.91
TSPAN3-207ENST00000559494 ABCA7Q8IZY2 2146 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 TARSL2A2RTX5 802 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 SMAD6O43541 496 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 SLC20A2Q08357 652 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 PARP15Q460N3 678 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 ACCSLQ4AC99 568 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 ZFYVE27Q5T4F4 411 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 RETSATQ6NUM9 610 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 DAAM2Q86T65 1068 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 TMPRSS6Q8IU80 811 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 MAP7D3Q8IWC1 876 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 TP53INP2Q8IXH6 220 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 TXLNBQ8N3L3 684 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 ATP11CQ8NB49 1132 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 OR2T3Q8NH03 318 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 PCDH19Q8TAB3 1148 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 CALN1Q9BXU9 219 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 BCCIPQ9P287 314 aaKnown RBP eCLIP20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 HPCAL4Q9UM19 191 aa20.73■□□□□ 0.91
TSPAN3-207ENST00000559494 EDDM13A0A1B0GTR0 161 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 GRID2IPA4D2P6 1211 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 C3orf70A6NLC5 250 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 ZBTB24O43167 697 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms