RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CCDC50Q8IVM0 306 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 SLC35B2Q8TB61 432 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 FAM3CQ92520 227 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 HDAC11Q96DB2 347 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 C16orf45Q96MC5 204 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 HEMGNQ9BXL5 484 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 CD248Q9HCU0 757 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 LTB4R2Q9NPC1 389 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 ELOVL2Q9NXB9 296 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 VPS51Q9UID3 782 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 HS3ST2Q9Y278 367 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 ZNF318Q5VUA4 2279 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 KANSL1LA0AUZ9 987 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 ANTXRLA6NF34 631 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 PRAMEF11O60813 436 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 TJP3O95049 919 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 ASLP04424 464 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 GLDCP23378 1020 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 TARSP26639 723 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 CETN2P41208 172 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 GARSP41250 739 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 SULT2A1Q06520 285 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 PPIDQ08752 370 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 XRCC4Q13426 336 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 PRKD1Q15139 912 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 PON2Q15165 354 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 ZFYVE27Q5T4F4 411 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 SEL1L2Q5TEA6 688 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 MBLAC2Q68D91 279 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 DRICH1Q6PGQ1 229 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 NPNTQ6UXI9 565 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF852Q6ZMS4 543 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 ARHGAP36Q6ZRI8 547 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 MAML1Q92585 1016 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 EXOC4Q96A65 974 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 CLDN23Q96B33 292 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 SHDQ96IW2 340 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 CELF6Q96J87 481 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 C2orf49Q9BVC5 232 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 BRD8Q9H0E9 1235 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 THAP10Q9P2Z0 257 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 SAE1Q9UBE0 346 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 CA14Q9ULX7 337 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 SAR1BQ9Y6B6 198 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 CKAP5Q14008 2032 aa15.14■□□□□ 0.01
SNRPA1-207ENST00000559309 ARHGAP42A6NI28 874 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 SNAP91O60641 907 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF821O75541 412 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 EGFP01133 1207 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 FGGP02679 453 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 APODP05090 189 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 SRPRAP08240 638 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 DLDP09622 509 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 CCNCP24863 283 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 DNA2P51530 1060 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 KDSRQ06136 332 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 IL10RBQ08334 325 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 SLC20A2Q08357 652 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 LLGL1Q15334 1064 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 OASLQ15646 514 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 CYP1B1Q16678 543 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 FBXO43Q4G163 708 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 INO80DQ53TQ3 878 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 KAZNQ674X7 775 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 TRIM67Q6ZTA4 783 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF572Q7Z3I7 529 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ALYREFQ86V81 257 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 CCDC117Q8IWD4 279 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 SIX5Q8N196 739 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 SYNPOQ8N3V7 929 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 TEX26Q8N6G2 289 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 NETO2Q8NC67 525 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ACTL9Q8TC94 416 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF419Q96HQ0 510 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF599Q96NL3 588 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 NELL2Q99435 816 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 FRMD8P1Q9BZ68 369 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 TMEM245Q9H330 911 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ATP13A1Q9HD20 1204 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 DLGAP2Q9P1A6 1054 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 VPS28Q9UK41 221 aa15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 R3HDM2Q9Y2K5 976 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-207ENST00000559309 ZSCAN5CA6NGD5 496 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 ESPNB1AK53 854 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CHURC1-FNTBB4DL54 471 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 J3KR12 359 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 NPC1O15118 1278 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF185O15231 689 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 ATP9BO43861 1147 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CEP104O60308 925 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 MX2P20592 715 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CD72P21854 359 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CASQ1P31415 396 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CTSOP43234 321 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 ECT2LQ008S8 904 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 OTUD4Q01804 1114 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms