RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 CBX8Q9HC52 389 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 NDFIP2Q9NV92 336 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 VPS51Q9UID3 782 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 ITIH6Q6UXX5 1313 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 LRRC53A6NM62 1247 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 CBX4O00257 560 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 WNT9AO14904 365 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 CCP110O43303 1012 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 RTN2O75298 545 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SERPINC1P01008 464 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 IGHV4-34P06331 123 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SRCP12931 536 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 CD59P13987 128 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 FERP16591 822 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 GPD1P21695 349 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.36
SMAD3-208ENST00000558827 OXCT1P55809 520 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 HDAC4P56524 1084 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 RPL7AP62424 266 aaKnown RBP12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SEMA3BQ13214 749 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 ASIC2Q16515 512 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 KIF19Q2TAC6 998 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 FILIP1LQ4L180 1135 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 E4F1Q66K89 784 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 DNAJC24Q6P3W2 148 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 MON1BQ7L1V2 547 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 BNIPLQ7Z465 357 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 RABEPKQ7Z6M1 372 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 PHF13Q86YI8 300 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SH2D3CQ8N5H7 860 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 KDM1BQ8NB78 822 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 C1orf216Q8TAB5 229 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 OR8D1Q8WZ84 308 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 KLK6Q92876 244 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SLC6A18Q96N87 628 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 MCEEQ96PE7 176 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 HAPLN3Q96S86 360 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 GPATCH2LQ9NWQ4 482 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 OR12D3Q9UGF7 316 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
SMAD3-208ENST00000558827 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 SNX11Q9Y5W9 270 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 CEP295Q9C0D2 2601 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.36
SMAD3-208ENST00000558827 MAP1BP46821 2468 aaKnown RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ATP9BO43861 1147 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 CALB1P05937 261 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 PLEKP08567 350 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 GOT1P17174 413 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 DRD3P35462 400 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 PPP2CBP62714 309 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 PPP2CAP67775 309 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 KRT83P78385 493 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 SIM1P81133 766 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 IL9RQ01113 521 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 OGDHQ02218 1023 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 CNTN1Q12860 1018 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ELAVL3Q14576 367 aaKnown RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 HLA-BQ31612 363 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ACAD10Q6JQN1 1059 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 USP30Q70CQ3 517 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 MCOLN2Q8IZK6 566 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 PIP4K2CQ8TBX8 421 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 GRIN3AQ8TCU5 1115 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 SETD7Q8WTS6 366 aaKnown RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 CPLX3Q8WVH0 158 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 MYOCQ99972 504 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ORAI3Q9BRQ5 295 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ZYG11BQ9C0D3 744 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 SLC32A1Q9H598 525 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 ATP13A1Q9HD20 1204 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 AASDHPPTQ9NRN7 309 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 PLXNA2O75051 1894 aa12.82□□□□□ -0.36
SMAD3-208ENST00000558827 NYNRINQ9P2P1 1898 aaKnown RBP12.82□□□□□ -0.36
SMAD3-208ENST00000558827 TMEM131Q92545 1883 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 IGLV3-10A0A075B6K4 115 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 LRRC72A6NJI9 287 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms