RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 OR51B4Q9Y5P0 310 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 A0A087X0T9 212 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 ZSCAN5CA6NGD5 496 aaPredicted RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 MYO1FO00160 1098 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 KHNYNO15037 678 aaKnown RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 ALOX15BO15296 676 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 CCP110O43303 1012 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 AKR1B10O60218 316 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 PRPSAP2O60256 369 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 LRIG2O94898 1065 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 CYP1A2P05177 515 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 H2AFZP0C0S5 128 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 FAM228BP0C875 321 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 HOXB3P14651 431 aaPredicted RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 TGM1P22735 817 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 EPHB2P29323 1055 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 PCK1P35558 622 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 MPLP40238 635 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 HCAR3P49019 387 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 YBEYP58557 167 aaPredicted RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 RPS14P62263 151 aaKnown RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 GNA12Q03113 381 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 ZNF33AQ06730 810 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 ELAVL3Q14576 367 aaKnown RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 DLG2Q15700 870 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 SLC18A3Q16572 532 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 WDR45BQ5MNZ6 344 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 C9orf64Q5T6V5 341 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 MANEALQ5VSG8 457 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 LYSMD4Q5XG99 296 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 H2AFVQ71UI9 128 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 CYP2U1Q7Z449 544 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 TFAP2DQ7Z6R9 452 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 SYT12Q8IV01 421 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 TMEFF1Q8IYR6 380 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 C12orf50Q8NA57 414 aaPredicted RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 DCAF4L2Q8NA75 395 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 ATP11CQ8NB49 1132 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 OR8D1Q8WZ84 308 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 PTPRN2Q92932 1015 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 RPL10LQ96L21 214 aaKnown RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 CCDC42Q96M95 316 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 RTKNQ9BST9 563 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 SPON2Q9BUD6 331 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 BTBD1Q9H0C5 482 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 SGK2Q9HBY8 427 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 TMPRSS4Q9NRS4 437 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 TMEM248Q9NWD8 314 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 ARHGAP20Q9P2F6 1191 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 MYO1AQ9UBC5 1043 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 IP6K2Q9UHH9 426 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 MBD1Q9UIS9 605 aaPredicted RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
TPM1-213ENST00000558400 CYP8B1Q9UNU6 501 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 RALGAPA1Q6GYQ0 2036 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 SDK1Q7Z5N4 2213 aa8.69□□□□□ -1.02
TPM1-213ENST00000558400 ANKRD11Q6UB99 2663 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 CNOT1A5YKK6 2376 aaKnown RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 A0A0D9SEW6 157 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 METTL12A8MUP2 240 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 WASH4PA8MWX3 477 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 TTC34A8MYJ7 566 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 AKR1B15C9JRZ8 316 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 CBX4O00257 560 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 MCF2LO15068 1137 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 FGF10O15520 208 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 RAMP2O60895 175 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 SIN3BO75182 1162 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 ADH1BP00325 375 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 GNSP15586 552 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 C5AR1P21730 350 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 BCKDHBP21953 392 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 SLC8A1P32418 973 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 GGCXP38435 758 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 RECQLP46063 649 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 IRAK1P51617 712 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 OGDHQ02218 1023 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 POLD3Q15054 466 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 CST6Q15828 149 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 DUOXA1Q1HG43 343 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 IL31Q6EBC2 164 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 PRR23CQ6ZRP0 262 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 NLRP14Q86W24 1093 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 SH2D3CQ8N5H7 860 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 CCDC185Q8N715 623 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 ZNF366Q8N895 744 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 OR52K2Q8NGK3 314 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 FRS2Q8WU20 508 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 CTNNBL1Q8WYA6 563 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 PIGKQ92643 395 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 ISG20Q96AZ6 181 aaKnown RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 TOE1Q96GM8 510 aaKnown RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 FAM129BQ96TA1 746 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 OMDQ99983 421 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms