RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 KATNAL2Q8IYT4 538 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 MICU2Q8IYU8 434 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 SRFBP1Q8NEF9 429 aaKnown RBP8.49□□□□□ -1.05
CHD8-213ENST00000557364 EXOSC4Q9NPD3 245 aaKnown RBP8.49□□□□□ -1.05
CHD8-213ENST00000557364 TBC1D23Q9NUY8 699 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 MARCOQ9UEW3 520 aaPredicted RBP8.49□□□□□ -1.05
CHD8-213ENST00000557364 ZNF229Q9UJW7 825 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 B2RBV5 119 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 CHADO15335 359 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 SEPT4O43236 478 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 TSPAN3O60637 253 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 SLC25A12O75746 678 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 PFKMP08237 780 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 SLC29A2Q14542 456 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 TAF13Q15543 124 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 CBWD6Q4V339 395 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 NEK10Q6ZWH5 1172 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 TDRD5Q8NAT2 981 aaKnown RBP8.49□□□□□ -1.05
CHD8-213ENST00000557364 CHAMP1Q96JM3 812 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 ACOX2Q99424 681 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 RIBC2Q9H4K1 309 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 ALG13Q9NP73 1137 aaKnown RBP8.49□□□□□ -1.05
CHD8-213ENST00000557364 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 FAM105AQ9NUU6 356 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 GALNT8Q9NY28 637 aa8.49□□□□□ -1.05
CHD8-213ENST00000557364 NCF1BA6NI72 391 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 NCF1CA8MVU1 366 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 OR10H2O60403 315 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 EPN2O95208 641 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 NCF1P14598 390 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 S100GP29377 79 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 GTF2BQ00403 316 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 SLC20A2Q08357 652 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 DGKZQ13574 1117 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ITIH4Q14624 930 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TSNQ15631 228 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 RFTN2Q52LD8 501 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 APOL4Q9BPW4 351 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 PDE9AO76083 593 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CLCN5P51795 746 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 SLC12A3P55017 1021 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ITGADQ13349 1161 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 SMAD1Q15797 465 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 LSM12Q3MHD2 195 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 EPC2Q52LR7 807 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 EID3Q8N140 333 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 RP9Q8TA86 221 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 HNRNPLLQ8WVV9 542 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 ZNF670Q9BS34 389 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 MIR1-1HGQ9H1L0 117 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 BATF3Q9NR55 127 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 UBR1Q8IWV7 1749 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 KRT33AO76009 404 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 OGNP20774 298 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 DDX6P26196 483 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHD8-213ENST00000557364 ZNF143P52747 638 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 ENPEPQ07075 957 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 MIER2Q8N344 545 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 METTL6Q8TCB7 284 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 PACSIN1Q9BY11 444 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ASB3Q9Y575 518 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TRUB2O95900 331 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 SERPINE1P05121 402 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ELFN1P0C7U0 828 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 PPIBP23284 216 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 RPIAP49247 311 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CSHL1Q14406 222 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TBC1D25Q3MII6 688 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 PARP15Q460N3 678 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ATP13A5Q4VNC0 1218 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 PSTKQ8IV42 348 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 IRGQQ8WZA9 623 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ELMO1Q92556 727 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CD101Q93033 1021 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 NR2E1Q9Y466 385 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 HEBP2Q9Y5Z4 205 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 FAM86B1E9PN63 330 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TBL1XO60907 577 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 KRT34O76011 436 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CTDNEP1O95476 244 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CPSF4O95639 269 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 MMP3P08254 477 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 FAM86B2P0C5J1 330 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CCDC159P0C7I6 412 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 VAV1P15498 845 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CALB2P22676 271 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 EPS8Q12929 822 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TOMM20Q15388 145 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CRY2Q49AN0 593 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 GJC2Q5T442 439 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 RBFAQ8N0V3 343 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ERP27Q96DN0 273 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CCT8L2Q96SF2 557 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 PAFAH2Q99487 392 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ACO2Q99798 780 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 PRDM8Q9NQV8 689 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 VPS45Q9NRW7 570 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 A0A087X0T9 212 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 A0A0A0MRY4 1105 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms