RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MS4A18H0YCH9 400 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 LIASO43766 372 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 PRSS2P07478 247 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 PKMP14618 531 aaKnown RBP4.57□□□□□ -1.68
VRK1-207ENST00000557352 PRPH2P23942 346 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 NEK3P51956 506 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 TMPRSS3P57727 454 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 PICALMQ13492 652 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 IZUMO4Q1ZYL8 232 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 FSCBQ5H9T9 825 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 C9orf50Q5SZB4 431 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 PRSS57Q6UWY2 283 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 USP43Q70EL4 1123 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 SRLQ86TD4 932 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 CUZD1Q86UP6 607 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 HDHD5Q9BXW7 423 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 KLHL31Q9H511 634 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 Q9N2J8 555 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 PCDHGB1Q9Y5G3 927 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 MROH2BQ7Z745 1585 aa4.57□□□□□ -1.68
VRK1-207ENST00000557352 CAND2O75155 1236 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 HEXIM1O94992 359 aaKnown RBP4.56□□□□□ -1.68
VRK1-207ENST00000557352 TNFRSF6BO95407 300 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 PPP1R3DO95685 299 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 UNGP13051 313 aaPredicted RBP4.56□□□□□ -1.68
VRK1-207ENST00000557352 CYP2J2P51589 502 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 PKP1Q13835 747 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 SPARCL1Q14515 664 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 FAM171A1Q5VUB5 890 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 FAM71BQ8TC56 605 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 TMEM41AQ96HV5 264 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 TNIP3Q96KP6 325 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 APOLD1Q96LR9 279 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 SLITRK1Q96PX8 696 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 PDE11AQ9HCR9 933 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 PLSCR4Q9NRQ2 329 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 TMEM248Q9NWD8 314 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 GEMIN8Q9NWZ8 242 aaKnown RBP4.56□□□□□ -1.68
VRK1-207ENST00000557352 RAP2CQ9Y3L5 183 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 WIZO95785 1651 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 SMARCA2P51531 1590 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 CECR2Q9BXF3 1484 aa4.56□□□□□ -1.68
VRK1-207ENST00000557352 GOLGA6L3A6NEY3 463 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 SAC3D1A6NKF1 404 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 CYSRT1A8MQ03 144 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 BTBD18B2RXH4 712 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 VWA5AO00534 786 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 GYS1P13807 737 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 GNLYP22749 145 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 PPM1AP35813 382 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 AVPR1AP37288 418 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 TECP42680 631 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 PPP3CCP48454 512 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 PCP4P48539 62 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 COMPP49747 757 aaPredicted RBP4.55□□□□□ -1.68
VRK1-207ENST00000557352 CDK7P50613 346 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 OAZ1P54368 228 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 KIF5AQ12840 1032 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 PTK2BQ14289 1009 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 HNF4GQ14541 408 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 STARD3Q14849 445 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 TBRG1Q3YBR2 411 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 TDRD12Q587J7 1177 aaKnown RBP4.55□□□□□ -1.68
VRK1-207ENST00000557352 MTFR2Q6P444 385 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 CLIP4Q8N3C7 705 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 HORMAD2Q8N7B1 307 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 MDFICQ9P1T7 246 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 SLC25A13Q9UJS0 675 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 CDC23Q9UJX2 597 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 RAI2Q9Y5P3 530 aa4.55□□□□□ -1.68
VRK1-207ENST00000557352 EIF4G1Q04637 1599 aaKnown RBP4.54□□□□□ -1.68
VRK1-207ENST00000557352 A0A1B0GUV1 79 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 EFCAB8A8MWE9 144 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 GRM8O00222 908 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 LDB2O43679 373 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 HLA-DQA2P01906 255 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 KRT18P05783 430 aaKnown RBP4.54□□□□□ -1.68
VRK1-207ENST00000557352 FCGR1AP12314 374 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 TYK2P29597 1187 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 BTKQ06187 659 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 CDK18Q07002 472 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 C5orf22Q49AR2 442 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 ATPAF1Q5TC12 328 aaPredicted RBP4.54□□□□□ -1.68
VRK1-207ENST00000557352 HEPHL1Q6MZM0 1159 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 C8orf82Q6P1X6 216 aaPredicted RBP4.54□□□□□ -1.68
VRK1-207ENST00000557352 C16orf82Q7Z2V1 217 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 ARMC9Q7Z3E5 817 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 FAM186BQ8IYM0 893 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 CEP76Q8TAP6 659 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 ZNF333Q96JL9 665 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 RTKNQ9BST9 563 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 ZNF556Q9HAH1 456 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 ARNT2Q9HBZ2 717 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 OBP2BQ9NPH6 170 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 SLC22A11Q9NSA0 550 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 TOP2AP11388 1531 aaKnown RBP4.54□□□□□ -1.68
VRK1-207ENST00000557352 HMGXB3Q12766 1538 aa4.54□□□□□ -1.68
VRK1-207ENST00000557352 PRDM2Q13029 1718 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 LGALS16A8MUM7 142 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 FFAR2O15552 330 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms