RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CCDC15Q0P6D6 951 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 ARL13BQ3SXY8 428 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 GLE1Q53GS7 698 aaKnown RBP4.34□□□□□ -1.71
CHD8-212ENST00000557329 PRAMEF19Q5SWL8 479 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 APOBEC3HQ6NTF7 200 aaKnown RBP4.34□□□□□ -1.71
CHD8-212ENST00000557329 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 USP49Q70CQ1 688 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 KCTD20Q7Z5Y7 419 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 GPR142Q7Z601 462 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 SLC44A5Q8NCS7 719 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 TDRD7Q8NHU6 1098 aaKnown RBP4.34□□□□□ -1.71
CHD8-212ENST00000557329 ZNF398Q8TD17 642 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 TBC1D22AQ8WUA7 517 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 LPAR1Q92633 364 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 FAM84BQ96KN1 310 aaPredicted RBP4.34□□□□□ -1.71
CHD8-212ENST00000557329 C1QTNF7Q9BXJ2 289 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 SLC27A6Q9Y2P4 619 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 SLC45A1Q9Y2W3 748 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 CEP83Q9Y592 693 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
CHD8-212ENST00000557329 DLG5Q8TDM6 1919 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 TCRBV5S1A1TA0A578 114 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PI4K2BG5E9Z4 385 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 SPRY2O43597 315 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 FGF18O76093 207 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 WDR47O94967 919 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 ERBB2P04626 1255 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 IGKV5-2P06315 115 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CD63P08962 238 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PRR35P0CG20 571 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CYP2D6P10635 497 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CYP2A6P11509 494 aaPredicted RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 ALADP13716 330 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 MYOGP15173 224 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 TSHRP16473 764 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PTGER1P34995 402 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 TMPOP42166 694 aaKnown RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 COPB1P53618 953 aaKnown RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 GPS1Q13098 491 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 GCKRQ14397 625 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 KCNB1Q14721 858 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 ACOX1Q15067 660 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 RAB30Q15771 203 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PFKFB3Q16875 520 aaPredicted RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 SLC5A9Q2M3M2 681 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 TMEM119Q4V9L6 283 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 MAP3K21Q5TCX8 1036 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CCDC30Q5VVM6 783 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CDC42EP5Q6NZY7 148 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 CLEC9AQ6UXN8 241 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 KSR2Q6VAB6 950 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 ZNF782Q6ZMW2 699 aaPredicted RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 DCDC5Q6ZRR9 648 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 RINLQ6ZS11 566 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 TMEM199Q8N511 208 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 BCAS4Q8TDM0 211 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 DENND1AQ8TEH3 1009 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 ARNTL2Q8WYA1 636 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 RITA1Q96K30 269 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 ZBTB45Q96K62 511 aaPredicted RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 PLEKHF1Q96S99 279 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 APOL5Q9BWW9 433 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PRSS22Q9GZN4 317 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PORCNQ9H237 461 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 MTIF3Q9H2K0 278 aaKnown RBP4.33□□□□□ -1.72
CHD8-212ENST00000557329 MYH16Q9H6N6 1097 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 NECTIN3Q9NQS3 549 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 BABAM1Q9NWV8 329 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 ZNF112Q9UJU3 913 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 FZD4Q9ULV1 537 aa4.33□□□□□ -1.72
CHD8-212ENST00000557329 PLXNA1Q9UIW2 1896 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 LAMB1P07942 1786 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 MUC6Q6W4X9 2439 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 XIRP2A4UGR9 3374 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 OR2W5A6NFC9 320 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 F8W8V4 182 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 CHL1O00533 1208 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 PMM2O15305 246 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 PDE8BO95263 885 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 VNN1O95497 513 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 GLP2RO95838 553 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 PGK1P00558 417 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 VIPP01282 170 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 FGBP02675 491 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
CHD8-212ENST00000557329 CSF2RAP15509 400 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 DUSP1P28562 367 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 TACR3P29371 465 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ATICP31939 592 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 MMP13P45452 471 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 PRIM2P49643 509 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 ALDH5A1P51649 535 aaPredicted RBP4.32□□□□□ -1.72
CHD8-212ENST00000557329 CCNA1P78396 465 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 PSG6Q00889 435 aa4.32□□□□□ -1.72
CHD8-212ENST00000557329 GHRHRQ02643 423 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms