RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 METTL21CQ5VZV1 264 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 SEL1L3Q68CR1 1132 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 CLEC14AQ86T13 490 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 ZDHHC17Q8IUH5 632 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 DTNBP1Q96EV8 351 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 SCYL1Q96KG9 808 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 ACE2Q9BYF1 805 aaPredicted RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 HSFX1Q9UBD0 423 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 SSC5DA1L4H1 1573 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 TMEM114B3SHH9 223 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 HDAC3O15379 428 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SBK3P0C264 359 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NUMBP49757 651 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NDUFV1P49821 464 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SNX16P57768 344 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 TMEM62Q0P6H9 643 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 MPP3Q13368 585 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 ZNF460Q14592 562 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 GRM3Q14832 879 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NRF1Q16656 503 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 B3GNT6Q6ZMB0 384 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 AMIGO2Q86SJ2 522 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 KCNMB4Q86W47 210 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 TTC39CQ8N584 583 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NFKBIZQ9BYH8 718 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SEMA6AQ9H2E6 1030 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 Q9H521 79 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 BFARQ9NZS9 450 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 GJD2Q9UKL4 321 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 RAB26Q9ULW5 256 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PRPF19Q9UMS4 504 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 NFKBIEO00221 500 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 ZBTB24O43167 697 aaPredicted RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 MPOP05164 745 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 ZNF286BP0CG31 522 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 ARSAP15289 507 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NELFEP18615 380 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 RPS12P25398 132 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 PTPN3P26045 913 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PCSK6P29122 969 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PPARGP37231 505 aaPredicted RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 MATKP42679 507 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 RPL26P61254 145 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 ADIGQ0VDE8 80 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 ART3Q13508 389 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SYPL2Q5VXT5 272 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 TMEM135Q86UB9 458 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PSTKQ8IV42 348 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 ANKRD52Q8NB46 1076 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 RP9Q8TA86 221 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 PPP1R13LQ8WUF5 828 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 AFG1LQ8WV93 481 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SREK1Q8WXA9 508 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 ISL2Q96A47 359 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 LENG1Q96BZ8 264 aaPredicted RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 VPS39Q96JC1 886 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 OMDQ99983 421 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 EPB41L1Q9H4G0 881 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 SUDS3Q9H7L9 328 aaPredicted RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PTTG2Q9NZH5 202 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NDUFA13Q9P0J0 144 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 ADAM28Q9UKQ2 775 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 PHF24Q9UPV7 400 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 RUVBL2Q9Y230 463 aaKnown RBP11.6□□□□□ -0.55
SRP54-213ENST00000556994 FIS1Q9Y3D6 152 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 RAP2CQ9Y3L5 183 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 NUP205Q92621 2012 aa11.6□□□□□ -0.55
SRP54-213ENST00000556994 H3BSA7 217 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 M0QYT0 321 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 EEF2KO00418 725 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 RNASEH2AO75792 299 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 STAU1O95793 577 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 ME2P23368 584 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 NMBRP28336 390 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 BCAT1P54687 386 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 VGLL4Q14135 290 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 CYTH1Q15438 398 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 SLC25A52Q3SY17 297 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 OTUD1Q5VV17 481 aaPredicted RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 FAM219BQ5XKK7 198 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 STRADAQ7RTN6 431 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 TICAM1Q8IUC6 712 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 TMEM151AQ8N4L1 468 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 KCTD4Q8WVF5 259 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 ATP6V1E2Q96A05 226 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 APBA2Q99767 749 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 SENP6Q9GZR1 1112 aaPredicted RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 DRC3Q9H069 523 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 TXNRD2Q9NNW7 524 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms