RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 NPWQ8N729 165 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 DCAF4L2Q8NA75 395 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 NOA1Q8NC60 698 aaKnown RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 BHMTQ93088 406 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 RTP4Q96DX8 246 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 HMCESQ96FZ2 354 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 P2RY11Q96G91 374 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 LGMNQ99538 433 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 FAM118BQ9BPY3 351 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 KXD1Q9BQD3 176 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 FEM1AQ9BSK4 669 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 FAM129AQ9BZQ8 928 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 KLC2Q9H0B6 622 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PLK2Q9NYY3 685 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 KLHL8Q9P2G9 620 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 DEC1Q9P2X7 70 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 UBA2Q9UBT2 640 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ZNF212Q9UDV6 495 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 SLC25A13Q9UJS0 675 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 SLC8A2Q9UPR5 921 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ANAPC1Q9H1A4 1944 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 A0A0A0MRY4 1105 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 E7EVH7 732 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 CBX4O00257 560 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 CACNG3O60359 315 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 MAFKO60675 156 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 PRAMEF11O60813 436 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 HEXIM1O94992 359 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 ASLP04424 464 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 PABPC1P11940 636 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 POLR2EP19388 210 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 HSPA9P38646 679 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 EIF2DP41214 584 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 PTGIRP43119 386 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 TNNT3P45378 269 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 DGKGP49619 791 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 IRAK1P51617 712 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 SGSHP51688 502 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 GUCY2DQ02846 1103 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 CUL1Q13616 776 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 HTR4Q13639 388 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 GRM2Q14416 872 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 ZNF235Q14590 738 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 LBRQ14739 615 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 PARP6Q2NL67 630 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 TEX44Q53QW1 395 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 INO80DQ53TQ3 878 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 RNF43Q68DV7 783 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 GRAMD4Q6IC98 578 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 CXorf57Q6NSI4 855 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 POTEHQ6S545 545 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 AHI1Q8N157 1196 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 MAFAQ8NHW3 353 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 UCMAQ8WVF2 138 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 FGF14Q92915 247 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 RSPRY1Q96DX4 576 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 MYEOVQ96EZ4 313 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 SNF8Q96H20 258 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 SPATA13Q96N96 652 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 LRRC3BQ96PB8 259 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 ACE2Q9BYF1 805 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 TSPYL1Q9H0U9 437 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 EBF3Q9H4W6 596 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 USP29Q9HBJ7 922 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 ABCB8Q9NUT2 735 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 NDFIP2Q9NV92 336 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 DNAJC17Q9NVM6 304 aaKnown RBP9.41□□□□□ -0.9
ACTN1-218ENST00000556343 RBM22Q9NW64 420 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■□□□ 11.9
ACTN1-218ENST00000556343 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 SEPT3Q9UH03 358 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 NUMBLQ9Y6R0 609 aa9.41□□□□□ -0.9
ACTN1-218ENST00000556343 NOTCH4Q99466 2003 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 A0A0D9SEW6 157 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 AP3B1O00203 1094 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 RNF103O00237 685 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ERLIN1O75477 346 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ANXA9O76027 345 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 JCHAINP01591 159 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 CYP17A1P05093 508 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ARSAP15289 507 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ACVRL1P37023 503 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 CSKP41240 450 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 MMP13P45452 471 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 CLCN6P51797 869 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ST8SIA6P61647 398 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 IFI35P80217 286 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 SLC7A5Q01650 507 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ITKQ08881 620 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 LMAN2Q12907 356 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 GPS1Q13098 491 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ERCC6LQ2NKX8 1250 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 PLEKHG6Q3KR16 790 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 MAP9Q49MG5 647 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ANKRD20A2Q5SQ80 823 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ARTNQ5T4W7 220 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms