RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NME7Q9Y5B8 376 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 PCDHB1Q9Y5F3 818 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 DOPEY1Q5JWR5 2465 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 A0A1W2PR77 199 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SUV39H1O43463 412 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 TACC1O75410 805 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 LDHAP00338 332 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 AFPP02771 609 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 IGHV4-34P06331 123 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 TMEM191BP0C7N4 346 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ATP5C1P36542 298 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ARRB1P49407 418 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SLC5A3P53794 718 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 GABREP78334 506 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 GRIN1Q05586 938 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 GOLGA8FQ08AF8 430 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 GOLGA8DPQ0D2H9 430 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SERINC3Q13530 473 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 EIF4HQ15056 248 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ARL13BQ3SXY8 428 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SFMBT2Q5VUG0 894 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 FYB2Q5VWT5 728 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 CDCP2Q5VXM1 449 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 KIAA0895LQ68EN5 471 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ANKS1BQ7Z6G8 1248 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ATG4DQ86TL0 474 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 CCDC83Q8IWF9 413 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 FBXO18Q8NFZ0 1043 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 OR6B3Q8NGW1 331 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SORCS1Q8WY21 1168 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SAAL1Q96ER3 474 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ANKRD36BP1Q96IX9 119 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 VCPIP1Q96JH7 1222 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SLC6A18Q96N87 628 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 MRPL45Q9BRJ2 306 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 POLR1BQ9H9Y6 1135 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 PDE11AQ9HCR9 933 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 SSU72Q9NP77 194 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 GDF3Q9NR23 364 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 THSD1Q9NS62 852 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 STARD5Q9NSY2 213 aa7.18□□□□□ -1.26
ATXN3-236ENST00000556220 ANKRD17O75179 2603 aaKnown RBP7.18□□□□□ -1.26
ATXN3-236ENST00000556220 TCHHQ07283 1943 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 A8MXQ7 604 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 USP12O75317 370 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 LEFTY1O75610 366 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 TNNC2P02585 160 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 DNTTP04053 509 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 KRT18P05783 430 aaKnown RBP7.17□□□□□ -1.26
ATXN3-236ENST00000556220 CD8BP10966 210 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 GARTP22102 1010 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 CD38P28907 300 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 CHKAP35790 457 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 RPS14P62263 151 aaKnown RBP7.17□□□□□ -1.26
ATXN3-236ENST00000556220 ST3GAL1Q11201 340 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
ATXN3-236ENST00000556220 LINC00303Q3SY05 128 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-236ENST00000556220 TMEM215Q68D42 235 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 KLHDC10Q6PID8 442 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 NXPE4Q6UWF7 544 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 SERPINA13PQ6UXR4 307 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 CCDC81Q6ZN84 652 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 PAQR9Q6ZVX9 377 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 KANSL1Q7Z3B3 1105 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 OXR1Q8N573 874 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 B3GALNT2Q8NCR0 500 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 OR5B17Q8NGF7 314 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 STK35Q8TDR2 534 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 ISL2Q96A47 359 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 HVCN1Q96D96 273 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-236ENST00000556220 STRA6Q9BX79 667 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 CIPCQ9C0C6 399 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 TMEM245Q9H330 911 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 DPEP3Q9H4B8 488 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 ERVMER34-1Q9H9K5 563 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 FBRSQ9HAH7 460 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 ASCL3Q9NQ33 180 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 TLR8Q9NR97 1041 aaKnown RBP7.17□□□□□ -1.26
ATXN3-236ENST00000556220 BLOC1S4Q9NUP1 217 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 INTS13Q9NVM9 706 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 CLEC4EQ9ULY5 219 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 EXOC7Q9UPT5 735 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 ZNF510Q9Y2H8 683 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 MYLKQ15746 1914 aa7.17□□□□□ -1.26
ATXN3-236ENST00000556220 GOLGA8IPA6NC78 632 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 GOLGA8JA6NMD2 632 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 TLR4O00206 839 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 WNT9AO14904 365 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 SLC26A4O43511 780 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 SIGLEC6O43699 453 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 TBCAO75347 108 aaKnown RBP7.16□□□□□ -1.26
ATXN3-236ENST00000556220 CST3P01034 146 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-236ENST00000556220 KLKB1P03952 638 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 CEACAM5P06731 702 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 MYF5P13349 255 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms