RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	KCNK13	Q9HB14	408 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	STARD7	Q9NQZ5	370 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	PQBP1	O60828	265 aa	Known RBP	12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	WBP4	O75554	376 aa	Known RBP	12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	CCNH	P51946	323 aa	Predicted RBP	12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	CA9	Q16790	459 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	C16orf46	Q6P387	395 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	P3H2	Q8IVL5	708 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	DEFB107A	Q8IZN7	70 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	PCDH19	Q8TAB3	1148 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	KCNN1	Q92952	543 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	LRRC39	Q96DD0	335 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	MAML3	Q96JK9	1138 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	TBCB	Q99426	244 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	USP29	Q9HBJ7	922 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	POPDC2	Q9HBU9	364 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	TUBGCP4	Q9UGJ1	667 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF180	Q9UJW8	692 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	PKP3	Q9Y446	797 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	NUMBL	Q9Y6R0	609 aa		12.51	□□□□□ -0.41
TMPO-212	ENST00000556029	CLPTM1	O96005	669 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	CSH1	P0DML2	217 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	CSH2	P0DML3	217 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	KCNA4	P22459	653 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	PNPLA4	P41247	253 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC6A3	Q01959	620 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	PTK2B	Q14289	1009 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	MAPRE2	Q15555	327 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	EFHC1	Q5JVL4	640 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	TRMT10B	Q6PF06	316 aa	Known RBP	12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	C4orf22	Q6V702	233 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	PCYOX1L	Q8NBM8	494 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	APBB2	Q92870	758 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF512	Q96ME7	567 aa	Predicted RBP	12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	C7orf26	Q96N11	449 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	EBNA1BP2	Q99848	306 aa	Known RBP	12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	B3GNT5	Q9BYG0	378 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	CACNG4	Q9UBN1	327 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	NRCAM	Q92823	1304 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC15A5	A6NIM6	579 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	SUPT3H	B4E1H0	165 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	GABRB2	P47870	512 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	BCAT1	P54687	386 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	DSG1	Q02413	1049 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	MAPK11	Q15759	364 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	FAM110C	Q1W6H9	321 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	NOL9	Q5SY16	702 aa	Known RBP	12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	KCNT2	Q6UVM3	1135 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	EFCAB3	Q8N7B9	438 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF333	Q96JL9	665 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	NRDE2	Q9H7Z3	1164 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	PRKAG2	Q9UGJ0	569 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	WDR27	A2RRH5	827 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	MAGEA13P	A6NCF6	341 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	CLDN5	O00501	218 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	TBX10	O75333	385 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	ALB	P02768	609 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	MMP3	P08254	477 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	FAM83E	Q2M2I3	478 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	IRGC	Q6NXR0	463 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	LCLAT1	Q6UWP7	414 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF276	Q8N554	614 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	RBM15B	Q8NDT2	890 aa	Known RBP	12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	SYT15	Q9BQS2	421 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	MAF1	Q9H063	256 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	AP4E1	Q9UPM8	1137 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	CDYL	Q9Y232	598 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	BRWD3	Q6RI45	1802 aa		12.5	□□□□□ -0.41
TMPO-212	ENST00000556029	BCLAF3	A2AJT9	711 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ABLIM1	O14639	778 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CRADD	P78560	199 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	MAPRE1	Q15691	268 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CYP2R1	Q6VVX0	501 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	KBTBD2	Q8IY47	623 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CLPTM1L	Q96KA5	538 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	SEPHS2	Q99611	448 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ECSIT	Q9BQ95	431 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	KLHL25	Q9H0H3	589 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PNPLA8	Q9NP80	782 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	THAP1	Q9NVV9	213 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CD274	Q9NZQ7	290 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF212	Q9UDV6	495 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	DOCK5	Q9H7D0	1870 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	TPR	P12270	2363 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	KLF11	O14901	512 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	KRT75	O95678	551 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	IRF1	P10914	325 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	TPH1	P17752	444 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PROZ	P22891	400 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	AMPD1	P23109	780 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	POU1F1	P28069	291 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CD52	P31358	61 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	S100A5	P33763	92 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	GBE1	Q04446	702 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ATP1A4	Q13733	1029 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ITGA9	Q13797	1035 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms