RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 INTS12Q96CB8 462 aaKnown RBP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 KLHL15Q96M94 604 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 HS6ST2Q96MM7 605 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 MMS19Q96T76 1030 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 YME1L1Q96TA2 773 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 ABHD14AQ9BUJ0 271 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 MXD3Q9BW11 206 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 CADM1Q9BY67 442 aaKnown RBP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 TXLNGYQ9BZA5 131 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 TRIM2Q9C040 744 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 FTOQ9C0B1 505 aaKnown RBP eCLIP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 PARD6AQ9NPB6 346 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 RBM28Q9NW13 759 aaKnown RBP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 TFCP2L1Q9NZI6 479 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 ANKFY1Q9P2R3 1169 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 PEMTQ9UBM1 199 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 ZNF70Q9UC06 446 aaPredicted RBP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 CFDP1Q9UEE9 299 aaPredicted RBP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 SLCO3A1Q9UIG8 710 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 ST6GALNAC2Q9UJ37 374 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 CDH22Q9UJ99 828 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 TESMINQ9Y4I5 508 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 SIRT4Q9Y6E7 314 aaPredicted RBP3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 RUSC2Q8N2Y8 1516 aa3.22□□□□□ -1.89
MTHFD1-212ENST00000555858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CCDC151A5D8V7 595 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 PABPN1LA6NDY0 278 aaKnown RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 MYO1GB0I1T2 1018 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CLIC1O00299 241 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 BCAT2O15382 392 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 STRNO43815 780 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CEP104O60308 925 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 BEST1O76090 585 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 PDE8BO95263 885 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 PGM3O95394 542 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 MT-CO3P00414 261 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 ADH4P08319 380 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 RFPL3SP0C7P2 107 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 EBLN1P0CF75 366 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 NR2F1P10589 423 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 ZNF8P17098 575 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 TGM2P21980 687 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 TYK2P29597 1187 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 NNMTP40261 264 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 GRIA3P42263 894 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 VPS41P49754 854 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 ZNF84P51523 738 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 DMWDQ09019 674 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 ABHD18Q0P651 414 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 STK4Q13043 487 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 AIMP2Q13155 320 aaKnown RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 SEMA3AQ14563 771 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 USP39Q53GS9 565 aaKnown RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 PCID2Q5JVF3 399 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 PLEKHS1Q5SXH7 462 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 LAIR1Q6GTX8 287 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 AADACL2Q6P093 401 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM154Q6P9G4 183 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 KLHL35Q6PF15 583 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 KCNV1Q6PIU1 500 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 C17orf99Q6UX52 265 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 RTL10Q7L3V2 364 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 GET4Q7L5D6 327 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 RNF144BQ7Z419 303 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 PEG10Q86TG7 708 aaKnown RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 GHDCQ8N2G8 530 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 C17orf53Q8N3J3 647 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CPXM2Q8N436 756 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 NKAIN3Q8N8D7 197 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 EXD3Q8N9H8 876 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CCDC191Q8NCU4 936 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 SETD9Q8NE22 299 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CADM4Q8NFZ8 388 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 NEK9Q8TD19 979 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 HSPH1Q92598 858 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 EXTL1Q92935 676 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 FAM149B1Q96BN6 582 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 HIC2Q96JB3 615 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 FYTTD1Q96QD9 318 aaKnown RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 BAG1Q99933 345 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 MAK16Q9BXY0 300 aaKnown RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 WDR11Q9BZH6 1224 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CIPCQ9C0C6 399 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 RSPH9Q9H1X1 276 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 SMARCAD1Q9H4L7 1026 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 SLC32A1Q9H598 525 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 KAT14Q9H8E8 782 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 SH3GLB2Q9NR46 395 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM248Q9NWD8 314 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 ASNSD1Q9NWL6 643 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 UPB1Q9UBR1 384 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 HSPB7Q9UBY9 170 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 CHORDC1Q9UHD1 332 aaPredicted RBP3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 DTX4Q9Y2E6 619 aa3.21□□□□□ -1.9
MTHFD1-212ENST00000555858 MAST3O60307 1309 aa3.2□□□□□ -1.9
MTHFD1-212ENST00000555858 SPATA31A5Q5VU36 1347 aa3.2□□□□□ -1.9
MTHFD1-212ENST00000555858 SPATA31A6Q5VVP1 1343 aa3.2□□□□□ -1.9
MTHFD1-212ENST00000555858 SPATA31A7Q8IWB4 1347 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms