RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MTSS1O43312 755 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 MAFKO60675 156 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 PRAMEF11O60813 436 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 ZMPSTE24O75844 475 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 PECAM1P16284 738 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 STARD6P59095 220 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 ECT2LQ008S8 904 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 IL10RBQ08334 325 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 RFTN1Q14699 578 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 SIX1Q15475 284 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 GEN1Q17RS7 908 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 WHAMMP3Q1A5X7 153 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 FBXO43Q4G163 708 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 INO80DQ53TQ3 878 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TMEM196Q5HYL7 178 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TXNDC11Q6PKC3 985 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 NPNTQ6UXI9 565 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 METTL3Q86U44 580 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 ATPAF2Q8N5M1 289 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 KDM1BQ8NB78 822 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 CCNYQ8ND76 341 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 SLC35B2Q8TB61 432 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TFB1MQ8WVM0 346 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 CASKIN2Q8WXE0 1202 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 NKD2Q969F2 451 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 HDAC11Q96DB2 347 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF599Q96NL3 588 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 FERMT1Q9BQL6 677 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 ARHGEF3Q9NR81 526 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 PLA2G4CQ9UP65 541 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 DRG1Q9Y295 367 aaKnown RBP12.74□□□□□ -0.37
SHMT2-221ENST00000555773 BCLAF3A2AJT9 711 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 PRRT4C9JH25 899 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 H7C0C1 242 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 NPC1O15118 1278 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 MATN3O15232 486 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 LIASO43766 372 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 RBP3P10745 1247 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 NNMTP40261 264 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 ATP5OP48047 213 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 ZXDAP98168 799 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 KDSRQ06136 332 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 CKAP4Q07065 602 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 PPIDQ08752 370 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 BYSLQ13895 437 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 HNRNPDQ14103 355 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 PON2Q15165 354 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 FUT11Q495W5 492 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 SLC45A4Q5BKX6 768 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 IER5LQ5T953 404 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 TMEM215Q68D42 235 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 ADAT2Q7Z6V5 191 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 CDKL3Q8IVW4 592 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 CCDC13Q8IYE1 715 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 PRELID2Q8N945 189 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 CIPCQ9C0C6 399 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 SP110Q9HB58 689 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 VPS51Q9UID3 782 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 MUTYHQ9UIF7 546 aa12.73□□□□□ -0.37
SHMT2-221ENST00000555773 R3HDM2Q9Y2K5 976 aaKnown RBP12.73□□□□□ -0.37
SHMT2-221ENST00000555773 CFAP69A5D8W1 941 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 SHISA7A6NL88 538 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 CCDC188H7C350 402 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 J3KR12 359 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 K7EQS6 105 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 SNAP91O60641 907 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 HNRNPLP14866 589 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 RENBPP51606 427 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 CLCN6P51797 869 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 ST8SIA6P61647 398 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 LMNB2Q03252 620 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 AP1B1Q10567 949 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 PRKD1Q15139 912 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 CYP1B1Q16678 543 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 DGKKQ5KSL6 1271 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 NAIF1Q69YI7 327 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 FSTL4Q6MZW2 842 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF572Q7Z3I7 529 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 BBS5Q8N3I7 341 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 C12orf50Q8NA57 414 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms