RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PID1Q7Z2X4 250 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SETD3Q86TU7 594 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 FBXO25Q8TCJ0 367 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 IRF7Q92985 503 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SNF8Q96H20 258 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 PWWP2AQ96N64 755 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 TSGA13Q96PP4 275 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 RPP25Q9BUL9 199 aaKnown RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 BBS2Q9BXC9 721 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 PLA2G2FQ9BZM2 168 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 BRD8Q9H0E9 1235 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 MUC3BQ9H195 1237 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 KIF9Q9HAQ2 790 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ZFP14Q9HCL3 533 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SPHK2Q9NRA0 654 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 FAM114A2Q9NRY5 505 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 FAM153AQ9UHL3 310 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 USP15Q9Y4E8 981 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 A0A0A0MRY4 1105 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 TCRBV7S3A2A0A539 114 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ILVBLA1L0T0 632 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 DNALI1O14645 258 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 MATN3O15232 486 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ZBTB24O43167 697 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 PEX11BO96011 259 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CYBBP04839 570 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 LAMP2P13473 410 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ARSAP15289 507 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 KCNA5P22460 613 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CSKP41240 450 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 MTHFRP42898 656 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 YBEYP58557 167 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 CALCOCO2Q13137 446 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 GRM2Q14416 872 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 TEX44Q53QW1 395 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ANKRD22Q5VYY1 191 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 PARM1Q6UWI2 310 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 VITQ6UXI7 678 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ARHGEF18Q6ZSZ5 1173 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 DEFB123Q8N688 67 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CNTD1Q8N815 330 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 NAT16Q8N8M0 369 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CCHCR1Q8TD31 782 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 OSCP1Q8WVF1 389 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CPT1BQ92523 772 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 FGF14Q92915 247 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SPATA13Q96N96 652 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 KXD1Q9BQD3 176 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 MAGEH1Q9H213 219 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 EBF3Q9H4W6 596 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SP110Q9HB58 689 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ATP13A1Q9HD20 1204 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 RAB6BQ9NRW1 208 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ZDHHC18Q9NUE0 388 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 PAK5Q9P286 719 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 KLHL8Q9P2G9 620 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 CD207Q9UJ71 328 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 TPX2Q9ULW0 747 aaKnown RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 TTLL3Q9Y4R7 772 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 OTOL1A6NHN0 477 aaPredicted RBP10.42□□□□□ -0.74
SRP54-208ENST00000555557 GOLGA8MH3BSY2 632 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 CBX4O00257 560 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 TRIM24O15164 1050 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 SNAP91O60641 907 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 TYRP14679 529 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
SRP54-208ENST00000555557 ITIH2P19823 946 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 MCM3P25205 808 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 TNFRSF8P28908 595 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 CD70P32970 193 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 CD68P34810 354 aaPredicted RBP10.42□□□□□ -0.74
SRP54-208ENST00000555557 ETFBP38117 255 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 GAD2Q05329 585 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 TNK2Q07912 1038 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 SLC10A7Q0GE19 358 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 CUL1Q13616 776 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 DHCR24Q15392 516 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 EML3Q32P44 896 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 MPP7Q5T2T1 576 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 LRRC49Q8IUZ0 686 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 APCDD1Q8J025 514 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 ART4Q93070 314 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 LRRC45Q96CN5 670 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 GUCD1Q96NT3 240 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 FERMT1Q9BQL6 677 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 FEM1AQ9BSK4 669 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 RETREG1Q9H6L5 497 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 TRPV4Q9HBA0 871 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 DNAJC17Q9NVM6 304 aaKnown RBP10.42□□□□□ -0.74
SRP54-208ENST00000555557 RBM22Q9NW64 420 aaKnown RBP eCLIP10.42□□□□□ -0.74
SRP54-208ENST00000555557 WHRNQ9P202 907 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 ANAPC5Q9UJX4 755 aa10.42□□□□□ -0.74
SRP54-208ENST00000555557 MYOFQ9NZM1 2061 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 HELZP42694 1942 aaKnown RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 CCDC151A5D8V7 595 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 GRXCR2A6NFK2 248 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 SLC9A3R1O14745 358 aaPredicted RBP10.41□□□□□ -0.74
SRP54-208ENST00000555557 PRAMEF11O60813 436 aa10.41□□□□□ -0.74
SRP54-208ENST00000555557 STK10O94804 968 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms