RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FGF19O95750 216 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 MT-CO1P00395 513 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 TYRP14679 529 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 FOSL2P15408 326 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 GDI1P31150 447 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 HCAR3P49019 387 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 TUBB4BP68371 445 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 PRSS36Q5K4E3 855 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 C6orf118Q5T5N4 469 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 NAIF1Q69YI7 327 aaPredicted RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 PPP1R21Q6ZMI0 780 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 C12orf50Q8NA57 414 aaPredicted RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 TSEN2Q8NCE0 465 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 SMARCD2Q92925 531 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 RBM15Q96T37 977 aaKnown RBP eCLIP10.42□□□□□ -0.74
NEK9-205ENST00000555405 PRMT1Q99873 361 aaKnown RBP10.42□□□□□ -0.74
NEK9-205ENST00000555405 PCDH9Q9HC56 1237 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 BCCIPQ9P287 314 aaKnown RBP eCLIP10.42□□□□□ -0.74
NEK9-205ENST00000555405 TRIOO75962 3097 aa10.42□□□□□ -0.74
NEK9-205ENST00000555405 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.41□□□□□ -0.74
NEK9-205ENST00000555405 ATP9BO43861 1147 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 MCM3P25205 808 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 PTPN3P26045 913 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 CD70P32970 193 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 CDH4P55283 916 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 KDSRQ06136 332 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 PTK6Q13882 451 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 POM121L1PQ3SYA9 428 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 PARM1Q6UWI2 310 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 LZTR1Q8N653 840 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
NEK9-205ENST00000555405 LEMD2Q8NC56 503 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 QKIQ96PU8 341 aaKnown RBP eCLIP10.41□□□□□ -0.74
NEK9-205ENST00000555405 TMEM248Q9NWD8 314 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 PAK5Q9P286 719 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
NEK9-205ENST00000555405 NEU2Q9Y3R4 380 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 CLUHO75153 1309 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 PDIA2Q13087 525 aaKnown RBP10.41□□□□□ -0.74
NEK9-205ENST00000555405 LRIT3Q3SXY7 679 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 MPPE1Q53F39 396 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 MANEALQ5VSG8 457 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 ATP11CQ8NB49 1132 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 CYB5D2Q8WUJ1 264 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 IRF7Q92985 503 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 RIPOR3Q96MK2 946 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 VPS37BQ9H9H4 285 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
NEK9-205ENST00000555405 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 STK19P49842 368 aaPredicted RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 WASHC5Q12768 1159 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 KYNUQ16719 465 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 CES3Q6UWW8 571 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 HTR3DQ70Z44 454 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 NLRP14Q86W24 1093 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 ZBED8Q8IZ13 594 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 FAM71BQ8TC56 605 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 FGF14Q92915 247 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 TNKS2Q9H2K2 1166 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 GDF3Q9NR23 364 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 SPHK2Q9NRA0 654 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 CDH7Q9ULB5 785 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 USP15Q9Y4E8 981 aaPredicted RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 A0A0A0MRY4 1105 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 E2F8A0AVK6 867 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 BCLAF3A2AJT9 711 aaKnown RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 TARSL2A2RTX5 802 aaKnown RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 CFAP69A5D8W1 941 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 DNALI1O14645 258 aaPredicted RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 MAFKO60675 156 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 PIRTP0C851 137 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 GKP32189 559 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 WASP42768 502 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 SOX9P48436 509 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 DSC2Q02487 901 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 IFFO1Q0D2I5 559 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 GALNT2Q10471 571 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 BRD3Q15059 726 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 TEX44Q53QW1 395 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 RHBDF2Q6PJF5 856 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 HOOK3Q86VS8 718 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 ADGRG2Q8IZP9 1017 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 CPT1BQ92523 772 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 CFAP36Q96G28 342 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 SPATA13Q96N96 652 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 ASB16Q96NS5 453 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 RUFY1Q96T51 708 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 CDX2Q99626 313 aaPredicted RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 TRIM56Q9BRZ2 755 aaKnown RBP10.4□□□□□ -0.74
NEK9-205ENST00000555405 MTG2Q9H4K7 406 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 GRHL1Q9NZI5 618 aa10.4□□□□□ -0.74
NEK9-205ENST00000555405 DRGXA6NNA5 263 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 A8MX80 341 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 ASGR2P07307 311 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 ITIH2P19823 946 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 LTBRP36941 435 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 CD86P42081 329 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 SLCO1A2P46721 670 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms