RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ABCB8Q9NUT2 735 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 POLR3BQ9NW08 1133 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-213ENST00000555386 MARK1Q9P0L2 795 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 OR12D3Q9UGF7 316 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 STOML2Q9UJZ1 356 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 NFS1Q9Y697 457 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 EIF3HO15372 352 aaKnown RBP eCLIP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 SPOPO43791 374 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 PENKP01210 267 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 KRT14P02533 472 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 DRD1P21728 446 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 CD70P32970 193 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 WASP42768 502 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 MLLT6P55198 1093 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 PIGHQ14442 188 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 CA9Q16790 459 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 GEN1Q17RS7 908 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 ALFQ53S48 1182 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 FSCBQ5H9T9 825 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 CROCCP2Q86T23 111 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 SLC13A5Q86YT5 568 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 JAMLQ86YT9 394 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 ETFBKMTQ8IXQ9 262 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 CCDC33Q8N5R6 958 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 TMEM105Q8N8V8 129 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 SORCS1Q8WY21 1168 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 EZH1Q92800 747 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 SLCO2A1Q92959 643 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 MSANTD3Q96H12 275 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 HAPLN3Q96S86 360 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 FMO2Q99518 471 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 LRFN3Q9BTN0 628 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 SNRNP25Q9BV90 132 aaKnown RBP10.12□□□□□ -0.79
PSEN1-213ENST00000555386 C1QTNF1Q9BXJ1 281 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 TXLNGYQ9BZA5 131 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 KLHL11Q9NVR0 708 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 LCMT1Q9UIC8 334 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 FZD10Q9ULW2 581 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 USP18Q9UMW8 372 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 AP4E1Q9UPM8 1137 aa10.12□□□□□ -0.79
PSEN1-213ENST00000555386 PRRT4C9JH25 899 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 K7EQS6 105 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 GFRA2O00451 464 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 NCAM2O15394 837 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 PROSCO94903 275 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 LUC7L3O95232 432 aaKnown RBP10.11□□□□□ -0.79
PSEN1-213ENST00000555386 CISD3P0C7P0 127 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 CHRNB1P11230 501 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 AOC1P19801 751 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 NR1D1P20393 614 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 IL1R2P27930 398 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 MAN1A1P33908 653 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 GRIA2P42262 883 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 PTGIRP43119 386 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 LMAN2Q12907 356 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF211Q13398 564 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-213ENST00000555386 LRRC32Q14392 662 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 UAP1Q16222 522 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-213ENST00000555386 CEP85LQ5SZL2 805 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 TXNRD3NBQ6F5E7 133 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 PKN3Q6P5Z2 889 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 C1orf228Q6PIY5 440 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 PRELID2Q8N945 189 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 TERB1Q8NA31 727 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 RPLP0P6Q8NHW5 317 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 FNIP1Q8TF40 1166 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 KRT35Q92764 455 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 NELL2Q99435 816 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 FAM107BQ9H098 131 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 TSPYL1Q9H0U9 437 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 NEUROG2Q9H2A3 272 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 LRRC19Q9H756 370 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 ZDHHC18Q9NUE0 388 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 SPATA6Q9NWH7 488 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-213ENST00000555386 GGA2Q9UJY4 613 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
PSEN1-213ENST00000555386 VPS13AQ96RL7 3174 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF318Q5VUA4 2279 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 SDK1Q7Z5N4 2213 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 SHROOM3Q8TF72 1996 aa10.11□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 A0A1B0GVM2 712 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TCAF2A6NFQ2 919 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 GPR37O15354 613 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 GPR37L1O60883 481 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 LRIG2O94898 1065 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 RHOCP08134 193 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 NUDT17P0C025 328 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PYGMP11217 842 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 EPHB2P29323 1055 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 HLA-FP30511 346 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 AVPR2P30518 371 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CLCN5P51795 746 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TAS2R40P59535 323 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TPI1P60174 286 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 GNGT1P63211 74 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 DHX9Q08211 1270 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms