RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLCO3A1Q9UIG8 710 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 MBD1Q9UIS9 605 aaPredicted RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 SCML1Q9UN30 329 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 A0A0D9SEW6 157 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 MEI4A8MW99 385 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 MYO1FO00160 1098 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 EEF2KO00418 725 aaKnown RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 SNAP91O60641 907 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 ADH1BP00325 375 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 CYP1A2P05177 515 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 MIPP30301 263 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 PCK1P35558 622 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 RECQLP46063 649 aaPredicted RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 PSMD8P48556 350 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 CLCN6P51797 869 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 ZNF75DP51815 510 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 GALCP54803 685 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 GEMIN4P57678 1058 aaKnown RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 DLG2Q15700 870 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 CSRP2Q16527 193 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 PPP6R3Q5H9R7 873 aaPredicted RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 SYCP2LQ5T4T6 812 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 C9orf64Q5T6V5 341 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 PSTKQ8IV42 348 aaKnown RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 MMAAQ8IVH4 418 aaKnown RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 SH2D3CQ8N5H7 860 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 OR7D4Q8NG98 312 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 OR52K2Q8NGK3 314 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 ZNF564Q8TBZ8 553 aaPredicted RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 PIGKQ92643 395 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 FOXJ1Q92949 421 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 ALG14Q96F25 216 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 MYO19Q96H55 970 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 RSPH9Q9H1X1 276 aaPredicted RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 MAGEH1Q9H213 219 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 NHEJ1Q9H9Q4 299 aaPredicted RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 ITM2CQ9NQX7 267 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 VPS45Q9NRW7 570 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
SRP54-206ENST00000555317 UVRAGQ9P2Y5 699 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 HS3ST2Q9Y278 367 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 OR51B4Q9Y5P0 310 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 LAMA1P25391 3075 aa12.39□□□□□ -0.43
SRP54-206ENST00000555317 NUMA1Q14980 2115 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 BCLAF3A2AJT9 711 aaKnown RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 C1QTNF3-AMACRE9PGA6 284 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 ATP9BO43861 1147 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 LRCH4O75427 683 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 IL1BP01584 269 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 ZNF135P52742 658 aaPredicted RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 RPS14P62263 151 aaKnown RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 SLC20A2Q08357 652 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 POLD3Q15054 466 aaPredicted RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 CST6Q15828 149 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 CCDC6Q16204 474 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 AASDHQ4L235 1098 aaPredicted RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 WDR45BQ5MNZ6 344 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 FAM46CQ5VWP2 391 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 LINGO4Q6UY18 593 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 Q6ZVU0 165 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 RGL4Q8IZJ4 473 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 DEFB119Q8N690 84 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 RTL3Q8N8U3 475 aaKnown RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 PSMB7Q99436 277 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 OMDQ99983 421 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 SNRNP25Q9BV90 132 aaKnown RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 GPR174Q9BXC1 333 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
SRP54-206ENST00000555317 ZWILCHQ9H900 591 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 CD93Q9NPY3 652 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 GPATCH2LQ9NWQ4 482 aa12.38□□□□□ -0.43
SRP54-206ENST00000555317 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 GOLGA6L6A8MZA4 724 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 PRR5-ARHGAP8B1AHC4 643 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 ALOX15BO15296 676 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 MID1O15344 667 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 RNASEH2AO75792 299 aaKnown RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 ZNF806P0C7X5 589 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 SRCP12931 536 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 ARL4AP40617 200 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 PTGER3P43115 390 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 DNA2P51530 1060 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 ARHGAP8P85298 464 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 ZNF33AQ06730 810 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 TBX2Q13207 712 aaPredicted RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 PARP15Q460N3 678 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 BOLA3Q53S33 107 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms