RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
ACTN1-214ENST00000555075 HAUS2Q9NVX0 235 aa12.34□□□□□ -0.43
ACTN1-214ENST00000555075 VPS51Q9UID3 782 aa12.34□□□□□ -0.43
ACTN1-214ENST00000555075 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
ACTN1-214ENST00000555075 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
ACTN1-214ENST00000555075 A0A0D9SEW6 157 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 WASH4PA8MWX3 477 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 SNAP91O60641 907 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 SP9P0CG40 484 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ZFXP17010 805 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 AMPD1P23109 780 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 KDELR1P24390 212 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 HOXC13P31276 330 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 CTSOP43234 321 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 PXNP49023 591 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 FNTBP49356 437 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 STK19P49842 368 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 NDST2P52849 883 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 SEMA3BQ13214 749 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ZNF528Q3MIS6 628 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ATP13A4Q4VNC1 1196 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 TMEM215Q68D42 235 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 TXNRD3NBQ6F5E7 133 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 LINGO4Q6UY18 593 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 METTL3Q86U44 580 aaKnown RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 LONP2Q86WA8 852 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 RNF10Q8N5U6 811 aaKnown RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ZNF366Q8N895 744 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ARHGEF2Q92974 986 aaKnown RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 RBM41Q96IZ5 413 aaKnown RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 CSPG4P5Q96PW8 444 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 GABRG3Q99928 467 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ZNF670Q9BS34 389 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 LACRTQ9GZZ8 138 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 PRMT8Q9NR22 394 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 ZSCAN32Q9NX65 697 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 REXO2Q9Y3B8 237 aaKnown RBP12.33□□□□□ -0.44
ACTN1-214ENST00000555075 DUSP10Q9Y6W6 482 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 USP34Q70CQ2 3546 aa12.33□□□□□ -0.44
ACTN1-214ENST00000555075 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 CCDC66A2RUB6 948 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 TTC34A8MYJ7 566 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 APOL1O14791 398 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 ADAM23O75077 832 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 PALMO75781 387 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 PAPSS2O95340 614 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 DNTTP04053 509 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 PRKCHP24723 683 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 ACVRL1P37023 503 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 CLCN6P51797 869 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 RAD51Q06609 339 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 TFDP2Q14188 446 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 DLG2Q15700 870 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 TTC31Q49AM3 519 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 ANKRD20A8PQ5CZ79 823 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 ZNF776Q68DI1 518 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 CACUL1Q86Y37 369 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 UMODL1-AS1Q8N2C9 162 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 ATPAF2Q8N5M1 289 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 OR2T3Q8NH03 318 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 OR8D1Q8WZ84 308 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 SIPA1Q96FS4 1042 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 HMCESQ96FZ2 354 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 LMLNQ96KR4 655 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 PRDM16Q9HAZ2 1276 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 DYRK4Q9NR20 520 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 UBA2Q9UBT2 640 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-214ENST00000555075 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 NCKAP1Q9Y2A7 1128 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 PCDHGA2Q9Y5H1 932 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 MYOFQ9NZM1 2061 aa12.32□□□□□ -0.44
ACTN1-214ENST00000555075 F5P12259 2224 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 ANTXRLA6NF34 631 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 MIF4GDA9UHW6 222 aaKnown RBP12.31□□□□□ -0.44
ACTN1-214ENST00000555075 C1QTNF3-AMACRE9PGA6 284 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 KDELR3O43731 214 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 GFRA3O60609 400 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 SIN3BO75182 1162 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 NDUFS2O75306 463 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 ZNF217O75362 1048 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 MX2P20592 715 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 CTNNA2P26232 953 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 CNR2P34972 360 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 SERPINH1P50454 418 aaKnown RBP12.31□□□□□ -0.44
ACTN1-214ENST00000555075 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
ACTN1-214ENST00000555075 RWDD2BP57060 319 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 RHOAP61586 193 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 DYNLT1P63172 113 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 CCZ1BP86790 482 aa12.31□□□□□ -0.44
ACTN1-214ENST00000555075 CCZ1P86791 482 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-214ENST00000555075 CCDC15Q0P6D6 951 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms