RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
SYNE2-214ENST00000554928 HMCESQ96FZ2 354 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 CELF6Q96J87 481 aaKnown RBP12.65□□□□□ -0.38
SYNE2-214ENST00000554928 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 FAM129BQ96TA1 746 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 EPAS1Q99814 870 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 ACE2Q9BYF1 805 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-214ENST00000554928 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 PARD6AQ9NPB6 346 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 ETNK2Q9NVF9 386 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
SYNE2-214ENST00000554928 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 SERGEFQ9UGK8 458 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
SYNE2-214ENST00000554928 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.39
SYNE2-214ENST00000554928 FRYLO94915 3013 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SDK1Q7Z5N4 2213 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 DOCK4Q8N1I0 1966 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 A0A0U1RQJ8 604 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 WASH4PA8MWX3 477 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 MYO1FO00160 1098 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 CBX4O00257 560 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 EEF2KO00418 725 aaKnown RBP12.64□□□□□ -0.39
SYNE2-214ENST00000554928 PLK4O00444 970 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 ATP9BO43861 1147 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 LCA5LO95447 670 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 MAGEA1P43355 309 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 ARSEP51690 589 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 OXCT1P55809 520 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 DPYSQ14117 519 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 MESDQ14696 234 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 DLG2Q15700 870 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 TMEFF1Q8IYR6 380 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 NPWQ8N729 165 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 KDM1BQ8NB78 822 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 ACRBPQ8NEB7 543 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SIPA1Q96FS4 1042 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 TNKS2Q9H2K2 1166 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SEMA4AQ9H3S1 761 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 GOLPH3Q9H4A6 298 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SMOC1Q9H4F8 434 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 PCDH18Q9HCL0 1135 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.64□□□□□ -0.39
SYNE2-214ENST00000554928 USP36Q9P275 1121 aaKnown RBP12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SALL4Q9UJQ4 1053 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
SYNE2-214ENST00000554928 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
SYNE2-214ENST00000554928 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 RASA4BC9J798 803 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 RASA4O43374 803 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 BNIP3LO60238 219 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 RAMP2O60895 175 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 DESP17661 470 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ERCC2P18074 760 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 TGM1P22735 817 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 AMPD1P23109 780 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 IL4RP24394 825 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 PTGER3P43115 390 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 SSR1P43307 286 aaKnown RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 TPMTP51580 245 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 SULT2A1Q06520 285 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ACAP1Q15027 740 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ZNF783Q6ZMS7 281 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 POLNQ7Z5Q5 900 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 FAM124AQ86V42 546 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ARHGAP12Q8IWW6 846 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ABCA7Q8IZY2 2146 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ATP11CQ8NB49 1132 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 CHST14Q8NCH0 376 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 RFFLQ8WZ73 363 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 TSC1Q92574 1164 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 PRCCQ92733 491 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 VOPP1Q96AW1 172 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ZC3H10Q96K80 434 aaKnown RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 C2orf49Q9BVC5 232 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 SLC39A8Q9C0K1 460 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 RSPH9Q9H1X1 276 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 LRRC19Q9H756 370 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 ITM2CQ9NQX7 267 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 SARDHQ9UL12 918 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
SYNE2-214ENST00000554928 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-214ENST00000554928 EIF3CLB5ME19 914 aaKnown RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 MID1O15344 667 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 MTA2O94776 668 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 NDUFA10O95299 355 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms