RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MARSP56192 900 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SLC25A3Q00325 362 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 PAN2Q504Q3 1202 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 PCID2Q5JVF3 399 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ARMC6Q6NXE6 501 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 MILR1Q7Z6M3 343 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 C1orf50Q9BV19 199 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 MTIF3Q9H2K0 278 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 HMG20AQ9NP66 347 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ADPRHL2Q9NX46 363 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 LNPEPQ9UIQ6 1025 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 AHCYL1O43865 530 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 CSDE1O75534 798 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ANPEPP15144 967 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ITGAXP20702 1163 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 MARCKSL1P49006 195 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 BST1Q10588 318 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SQLEQ14534 574 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 KBTBD2Q8IY47 623 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SYTL1Q8IYJ3 562 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 RTL3Q8N8U3 475 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 MIEF1Q9NQG6 463 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 CASZ1Q86V15 1759 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 RGS14O43566 566 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SEC22BO75396 215 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SERPINA6P08185 405 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 PPP2R1BP30154 601 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 CCT3P49368 545 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF618Q5T7W0 954 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 TSHZ1Q6ZSZ6 1077 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 BBS12Q6ZW61 710 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 UNC93AQ86WB7 457 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 IQCKQ8N0W5 287 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SMIM31A0A1B0GVY4 71 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 OPLAHO14841 1288 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ENTPD5O75356 428 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 KRT36O76013 467 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 TRUB2O95900 331 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF286BP0CG31 522 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 LBPP18428 481 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ACAT1P24752 427 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 TOP3AQ13472 1001 aaPredicted RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 MARK2Q7KZI7 788 aaKnown RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 STARD8Q92502 1023 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 CERS2Q96G23 380 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 SAE1Q9UBE0 346 aaPredicted RBP14.17□□□□□ -0.14
VTI1B-204ENST00000554659 CLUHO75153 1309 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 CASTOR2A6NHX0 329 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 PDK3Q15120 406 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 ZSWIM7Q19AV6 140 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 FBXW8Q8N3Y1 598 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 MBOAT7Q96N66 472 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 ROBO3Q96MS0 1386 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 hCG_1818297A0A087WSY0 165 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 LTA4HP09960 611 aaKnown RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 GLRA2P23416 452 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 GRK3P35626 688 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 FKBP1AP62942 108 aaKnown RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 CSNK2BP67870 215 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 DDR1Q08345 913 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 ELAVL2Q12926 359 aaKnown RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 RETSATQ6NUM9 610 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 TFAP2DQ7Z6R9 452 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 C8orf59Q8N0T1 100 aaPredicted RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 RASGEF1CQ8N431 466 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 ELOVL4Q9GZR5 314 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 PTPRHQ9HD43 1115 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 AHSPQ9NZD4 102 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 MORF4L1Q9UBU8 362 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 COMMD3-BMI1R4GMX3 469 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 KPNA6O60684 536 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 ENDOD1O94919 500 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 OR1E1P30953 314 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 NOS2P35228 1153 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 TRAF3Q13114 568 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 SDE2Q6IQ49 451 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 NEPROQ6NW34 567 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 AAGABQ6PD74 315 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM139Q8IV31 216 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 SLC16A10Q8TF71 515 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 RNF157Q96PX1 679 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 PHACTR1Q9C0D0 580 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 RIBC2Q9H4K1 309 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 AAASQ9NRG9 546 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 BTN3A1O00481 513 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 STAU1O95793 577 aaKnown RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 CKMP06732 381 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 PSMB4P28070 264 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 NR1H2P55055 460 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 NAA20P61599 178 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 CASP12Q6UXS9 341 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 MACC1Q6ZN28 852 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 RP9Q8TA86 221 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms