RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SPATA18Q8TC71 538 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SPPL3Q8TCT6 385 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ASB15Q8WXK1 588 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TFAP2BQ92481 460 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SYN2Q92777 582 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-212ENST00000554486 FOXRED1Q96CU9 486 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-212ENST00000554486 B3GALT6Q96L58 329 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 C16orf92Q96LL3 132 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 PWWP2AQ96N64 755 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 PANX2Q96RD6 677 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM209Q96SK2 561 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 PKMYT1Q99640 499 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ZSWIM1Q9BR11 485 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SYT11Q9BT88 431 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TTPALQ9BTX7 342 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 HERC2P3Q9BVR0 1158 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SNX25Q9H3E2 840 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 DPEP3Q9H4B8 488 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ZCCHC4Q9H5U6 513 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 IFT22Q9H7X7 185 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ABHD10Q9NUJ1 306 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 STXBP5LQ9Y2K9 1186 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 LAMA3Q16787 3333 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 PRAMEF25A6NGN4 478 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 EPOPA6NHQ4 379 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 A8MXQ7 604 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 GOLGA6L6A8MZA4 724 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ADAM12O43184 909 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 RB1P06400 928 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 PLEKP08567 350 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 PAEPP09466 180 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 INHBBP09529 407 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 SKILP12757 684 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 CYP11B1P15538 503 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 FERP16591 822 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 CHRNB2P17787 502 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 DNAJB1P25685 340 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 AOAHP28039 575 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 MC4RP32245 332 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 LHX1P48742 406 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ITGA1P56199 1179 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 GSDMDP57764 484 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 PSMC1P62191 440 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 SMAD3P84022 425 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 CDK17Q00537 523 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 KRT17Q04695 432 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 YWHAHQ04917 246 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 KLHL30Q0D2K2 578 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 RAB30Q15771 203 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 SMAD2Q15796 467 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 USP41Q3LFD5 358 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 FAM171BQ6P995 826 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 PRSS55Q6UWB4 352 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 TMC5Q6UXY8 1006 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 TTLL10Q6ZVT0 673 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF571Q7Z3V5 609 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ACOT1Q86TX2 421 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 METTL23Q86XA0 190 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 VPS52Q8N1B4 723 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 CRYBG2Q8N1P7 616 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 TTC39CQ8N584 583 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 EFHBQ8N7U6 833 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 B3GALNT2Q8NCR0 500 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 LNX1Q8TBB1 728 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 SLC20A1Q8WUM9 679 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 AUTS2Q8WXX7 1259 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 RIN2Q8WYP3 895 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 TMEM176AQ96HP8 235 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 SAMD11Q96NU1 681 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 TGS1Q96RS0 853 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 CHP1Q99653 195 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 SYT15Q9BQS2 421 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ACBD6Q9BR61 282 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ZBP1Q9H171 429 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 MS4A5Q9H3V2 200 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ALG13Q9NP73 1137 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 PARD6AQ9NPB6 346 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 TMLHEQ9NVH6 421 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 DDX43Q9NXZ2 648 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 ARHGAP20Q9P2F6 1191 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 MTRRQ9UBK8 725 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 MSRAQ9UJ68 235 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 NOCTQ9UK39 431 aaKnown RBP6.64□□□□□ -1.35
SCFD1-212ENST00000554486 CDH9Q9ULB4 789 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 LZTS1Q9Y250 596 aa6.64□□□□□ -1.35
SCFD1-212ENST00000554486 MYBPHLA2RUH7 354 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 OR6C75A6NL08 312 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF839A8K0R7 811 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 H7C4K7 107 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 O00370 1275 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CLDN5O00501 218 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 DDX3XO00571 662 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 GRM6O15303 877 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 GPR39O43194 453 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 THAP12O43422 761 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 VNN2O95498 520 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 SERPING1P05155 500 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 PTMAP06454 111 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms