RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 SLC10A6Q3KNW5 377 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 TIGD2Q4W5G0 525 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 USP39Q53GS9 565 aaKnown RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 NBPF12Q5TAG4 269 aaPredicted RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 CASC4Q6P4E1 433 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 RUFY4Q6ZNE9 571 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 MON1AQ86VX9 555 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 SCUBE3Q8IX30 993 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 DNAJC5GQ8N7S2 189 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 NETO2Q8NC67 525 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 C3orf58Q8NDZ4 430 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 KRT35Q92764 455 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 GFM2Q969S9 779 aaKnown RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 TMBIM1Q969X1 311 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 NMD3Q96D46 503 aaKnown RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 KIF12Q96FN5 646 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 ZNF578Q96N58 590 aaPredicted RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 TTC1Q99614 292 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 SOX7Q9BT81 388 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 KIFC1Q9BW19 673 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 ESRP2Q9H6T0 727 aaKnown RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 ERVMER34-1Q9H9K5 563 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 MRPL47Q9HD33 250 aaKnown RBP3.98□□□□□ -1.77
LRFN5-204ENST00000554171 POLLQ9UGP5 575 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 ZBTB21Q9ULJ3 1066 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 STX8Q9UNK0 236 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 JAG2Q9Y219 1238 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 MAN2B2Q9Y2E5 1009 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 KIF1BO60333 1816 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 ECM29Q5VYK3 1845 aa3.98□□□□□ -1.77
LRFN5-204ENST00000554171 MAP3K4Q9Y6R4 1608 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 FAM135BQ49AJ0 1406 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 CDK5RAP2Q96SN8 1893 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 A0A1W2PPC1 479 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 TMEM82A0PJX8 343 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 MARCH11A6NNE9 402 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 KERAO60938 352 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 BCAS1O75363 584 aaPredicted RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 GMNNO75496 209 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 KCNH1O95259 989 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 GM2AP17900 193 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 RHCEP18577 417 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PCGF2P35227 344 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ATP8B2P98198 1209 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 RHDQ02161 417 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 DSC1Q08554 894 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 MGAT3Q09327 533 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 SNAPC2Q13487 334 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 EIF4EBP2Q13542 120 aaPredicted RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 TTMPQ5BVD1 217 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 GID4Q8IVV7 300 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PCDH20Q8N6Y1 951 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 FAM181AQ8N9Y4 354 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 OR14C36Q8NHC7 312 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 CPLX3Q8WVH0 158 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 FAM122AQ96E09 287 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PPP1R36Q96LQ0 422 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 AK8Q96MA6 479 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 CRBNQ96SW2 442 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 TMEM120AQ9BXJ8 343 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 RNPEPQ9H4A4 650 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 SEPSECSQ9HD40 501 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 GPRC5CQ9NQ84 441 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ACTR3BQ9P1U1 418 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 DNAJB9Q9UBS3 223 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 NUP50Q9UKX7 468 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PADI4Q9UM07 663 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 GPR45Q9Y5Y3 372 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ARHGEF28Q8N1W1 1705 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PQLC2LA1A4F0 135 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 POTEMA6NI47 508 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ARVCFO00192 962 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 TRAF5O00463 557 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 RHOBTB1O94844 696 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 APBA3O96018 575 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 UBTFL6P0CB48 400 aaPredicted RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ODC1P11926 461 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 TGM1P22735 817 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 CCND1P24385 295 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PCSK6P29122 969 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 HMGCLP35914 325 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ATP12AP54707 1039 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 GTF2IP78347 998 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 COASYQ13057 564 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 MBTPS1Q14703 1052 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 SMAD2Q15796 467 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 POTEGQ6S5H5 508 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 PRR23CQ6ZRP0 262 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 USP49Q70CQ1 688 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 FRMD5Q7Z6J6 570 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 DCP1BQ8IZD4 617 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 OR8H3Q8N146 312 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 MINDY1Q8N5J2 469 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 DDX54Q8TDD1 881 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 ZNF384Q8TF68 577 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 EDAQ92838 391 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 UTP4Q969X6 686 aaKnown RBP3.97□□□□□ -1.77
LRFN5-204ENST00000554171 TM4SF18Q96CE8 201 aa3.97□□□□□ -1.77
LRFN5-204ENST00000554171 LTV1Q96GA3 475 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms