RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 ALOX15BO15296 676 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 SLC16A3O15427 465 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 SLC31A1O15431 190 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 MED7O43513 233 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 PLRG1O43660 514 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 USP12O75317 370 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 CSO75390 466 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 PCDH8O95206 1070 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 MPOP05164 745 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 RECQLP46063 649 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 STK19P49842 368 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 ERVPABLB-1P60509 514 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 KRT83P78385 493 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 FKBP3Q00688 224 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 KCNC4Q03721 635 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 MTA1Q13330 715 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 CNGA2Q16280 664 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 QPCTQ16769 361 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 PROX2Q3B8N5 592 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 CCDC40Q4G0X9 1142 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 FSCBQ5H9T9 825 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 NADSYN1Q6IA69 706 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 PMF1Q6P1K2 205 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 ERICH1Q86X53 443 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 SPATS2Q86XZ4 545 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 APCDD1Q8J025 514 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 OR4C6Q8NH72 309 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 MAPK15Q8TD08 544 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 DQX1Q8TE96 717 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 ERCC4Q92889 916 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 MED15Q96RN5 788 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 GTPBP4Q9BZE4 634 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 DPH1Q9BZG8 443 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 OSBPL2Q9H1P3 480 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 CLMPQ9H6B4 373 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 POLR1BQ9H9Y6 1135 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 USP29Q9HBJ7 922 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 NCKIPSDQ9NZQ3 722 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 IPO11Q9UI26 975 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 HOOK1Q9UJC3 728 aaKnown RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 VPS28Q9UK41 221 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 ATP6V1DQ9Y5K8 247 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 HEMK1Q9Y5R4 338 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-212ENST00000554158 DOCK4Q8N1I0 1966 aa8.39□□□□□ -1.07
ACTN1-212ENST00000554158 ASH1LQ9NR48 2969 aaKnown RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 SYNJ2BP-COX16A0A087WUM0 186 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 KPNA3O00505 521 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 TRIM38O00635 465 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 SLC28A2O43868 658 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 OPA1O60313 960 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 SMC2O95347 1197 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 GP1BAP07359 652 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 KRT5P13647 590 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 HNRNPA2B1P22626 353 aaKnown RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 DGKAP23743 735 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 LSSP48449 732 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 NUMBP49757 651 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 NDUFA8P51970 172 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 HNRNPKP61978 463 aaKnown RBP eCLIP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 KCNMA1Q12791 1236 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CNTN1Q12860 1018 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 DPYDQ12882 1025 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 ZNF177Q13360 481 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CBWD6Q4V339 395 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CBWD3Q5JTY5 395 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CBWD5Q5RIA9 395 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 FOXR1Q6PIV2 292 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 PTAR1Q7Z6K3 402 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 TAC4Q86UU9 113 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 DCP2Q8IU60 420 aaKnown RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 FAM181AQ8N9Y4 354 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CLEC4CQ8WTT0 213 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 SLC35F5Q8WV83 523 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 PPP1R16AQ96I34 528 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 RPRD1AQ96P16 312 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 POPDC2Q9HBU9 364 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 METTL14Q9HCE5 456 aaKnown RBP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CPNE5Q9HCH3 593 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 KLHL11Q9NVR0 708 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.38□□□□□ -1.07
ACTN1-212ENST00000554158 DNAJC28Q9NX36 388 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 NLGN3Q9NZ94 848 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 COX16Q9P0S2 106 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 NAALADL1Q9UQQ1 740 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 COQ4Q9Y3A0 265 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 PCDHB1Q9Y5F3 818 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 CHD5Q8TDI0 1954 aa8.38□□□□□ -1.07
ACTN1-212ENST00000554158 UNC13CQ8NB66 2214 aa8.37□□□□□ -1.07
ACTN1-212ENST00000554158 A0A1W2PQU0 124 aa8.37□□□□□ -1.07
ACTN1-212ENST00000554158 CPED1A4D0V7 1026 aa8.37□□□□□ -1.07
ACTN1-212ENST00000554158 GOLGA6L4A6NEF3 574 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms