RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 TBX4P57082 545 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 HNRNPKP61978 463 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD8-205ENST00000553651 AMPD3Q01432 767 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 STK4Q13043 487 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 CUL4BQ13620 913 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 FGL2Q14314 439 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 RABEP1Q15276 862 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 GOLGA7BQ2TAP0 167 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TPRG1LQ5T0D9 272 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 HIST2H2BCQ6DN03 193 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 OR6B2Q6IFH4 312 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 NEK5Q6P3R8 708 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 B3GNT8Q7Z7M8 397 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 HORMAD1Q86X24 394 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TPCN2Q8NHX9 752 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 ARHGAP9Q9BRR9 750 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 BOCQ9BWV1 1114 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 SLC25A18Q9H1K4 315 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 EPN3Q9H201 632 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 LRRC4Q9HBW1 653 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 CNGB3Q9NQW8 809 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 DNAJC28Q9NX36 388 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.9□□□□□ -0.82
CHD8-205ENST00000553651 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TSPAN16Q9UKR8 245 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 TRPM6Q9BX84 2022 aa9.9□□□□□ -0.82
CHD8-205ENST00000553651 ZFC3H1O60293 1989 aaKnown RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 SPTY2D1-AS1A0A0U1RR47 76 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 VPS37CA5D8V6 355 aaPredicted RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 POM121BA6NF01 834 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 PDXKO00764 312 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 PLD2O14939 933 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 MCF2LO15068 1137 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 MAPK13O15264 365 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 ALOX15BO15296 676 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 PPFIA2O75334 1257 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 MOCS3O95396 460 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 HNRNPA2B1P22626 353 aaKnown RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 AKT2P31751 481 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 UGT1A5P35504 534 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 INHBCP55103 352 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 BST2Q10589 180 aaKnown RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 IGFBP7Q16270 282 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 DEFB133Q30KQ1 61 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 C4orf17Q53FE4 359 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 FAM46CQ5VWP2 391 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 SEL1L3Q68CR1 1132 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 CXorf57Q6NSI4 855 aaKnown RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 SHC4Q6S5L8 630 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 Q6ZSR6 202 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 SLC35F3Q8IY50 421 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 LINC00301Q8NCQ3 95 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 OR52K2Q8NGK3 314 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 CLEC4CQ8WTT0 213 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 OR8D1Q8WZ84 308 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 IPO9Q96P70 1041 aaKnown RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 IMPG2Q9BZV3 1241 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 EVA1BQ9NVM1 165 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 SEPT3Q9UH03 358 aa9.89□□□□□ -0.83
CHD8-205ENST00000553651 PNMA8BQ9ULN7 279 aaPredicted RBP9.89□□□□□ -0.83
CHD8-205ENST00000553651 ABCA12Q86UK0 2595 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 A6NNZ2 444 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 O00370 1275 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 TPP1O14773 563 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 RAD51BO15315 384 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 SPINT1O43278 529 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 AQP9O43315 295 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 GCATO75600 419 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 PDGFRAP16234 1089 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 CYP4F2P78329 520 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 EIF2B5Q13144 721 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 MAPK8IP2Q13387 824 aaPredicted RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 SLC12A1Q13621 1099 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 NR0B2Q15466 257 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 SKIDA1Q1XH10 827 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 KMT5BQ4FZB7 885 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 RNF219Q5W0B1 726 aaPredicted RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 CEP135Q66GS9 1140 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 KYAT3Q6YP21 454 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 Q6ZVU0 165 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 DSG4Q86SJ6 1040 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 C14orf80Q86SX3 495 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 VASH2Q86V25 355 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 DCP2Q8IU60 420 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 LGI2Q8N0V4 545 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 UBR7Q8N806 425 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 IQUBQ8NA54 791 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 UBA3Q8TBC4 463 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 ZNF564Q8TBZ8 553 aaPredicted RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 DQX1Q8TE96 717 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 SLC35F5Q8WV83 523 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 IRGQQ8WZA9 623 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 EEF2KMTQ96G04 330 aa9.88□□□□□ -0.83
CHD8-205ENST00000553651 PRMT1Q99873 361 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 DDX50Q9BQ39 737 aaKnown RBP9.88□□□□□ -0.83
CHD8-205ENST00000553651 NCKIPSDQ9NZQ3 722 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms