RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PKN2Q16513 984 aaKnown RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TEX44Q53QW1 395 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TMCO4Q5TGY1 634 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 FAM72AQ5TYM5 149 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TTC39BQ5VTQ0 682 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 SNX30Q5VWJ9 437 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 AFMIDQ63HM1 303 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 STEAP4Q687X5 459 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 NAPEPLDQ6IQ20 393 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 FAM72DQ6L9T8 149 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 PID1Q7Z2X4 250 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TAX1BP1Q86VP1 789 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 FAM72BQ86X60 149 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ANKMY2Q8IV38 441 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 RNF168Q8IYW5 571 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF567Q8N184 647 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 UMODL1-AS1Q8N2C9 162 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 RTL3Q8N8U3 475 aaKnown RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 CKAP2Q8WWK9 683 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 AZIN2Q96A70 460 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ZBTB9Q96C00 473 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 STAMBPL1Q96FJ0 436 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 BTN2A3PQ96KV6 586 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 FCRL2Q96LA5 508 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 SIGLEC10Q96LC7 697 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TEKT5Q96M29 485 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 MAGEB18Q96M61 343 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF317Q96PQ6 595 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 LGMNQ99538 433 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 RHOBTB2Q9BYZ6 727 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 GPR62Q9BZJ7 368 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 UBE2OQ9C0C9 1292 aaKnown RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TRABDQ9H4I3 376 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 LRRC40Q9H9A6 602 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 KCNK9Q9NPC2 374 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 PPANQ9NQ55 473 aaKnown RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 MKS1Q9NXB0 559 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 MOCS1Q9NZB8 636 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 COX16Q9P0S2 106 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 SAMD15Q9P1V8 674 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 KLHL8Q9P2G9 620 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TBX21Q9UL17 535 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 HCN2Q9UL51 889 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 CHMP2BQ9UQN3 213 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 HBS1LQ9Y450 684 aaKnown RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 PCDHA11Q9Y5I1 949 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 IGLV3-10A0A075B6K4 115 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 GOLGA6L7A0A1B0GV03 622 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 FAM159BA6NKW6 160 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 F8W810 466 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TYROBPO43914 113 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 BAIAP3O94812 1187 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 KIAA0754O94854 1291 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 IGLV3-27P01718 113 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 MT-ND3P03897 115 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 AMHP03971 560 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SNRPAP09012 282 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 LAG3P18627 525 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 PTPN3P26045 913 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SSTR1P30872 391 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 PPM1AP35813 382 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 CCT5P48643 541 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 MAPKAPK2P49137 400 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TUBP50607 506 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 YBEYP58557 167 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TLE2Q04725 743 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SEPT7Q16181 437 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SKIDA1Q1XH10 827 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 MGAT5BQ3V5L5 792 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SPANXN3Q5MJ09 141 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 STXBP5Q5T5C0 1151 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 UBAP2Q5T6F2 1119 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 RWDD4Q6NW29 188 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 FOXR1Q6PIV2 292 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TIFABQ6ZNK6 161 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF534Q76KX8 674 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 CEP57Q86XR8 500 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SRRM1Q8IYB3 904 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 CMTR2Q8IYT2 770 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 CACNA2D3Q8IZS8 1091 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 ATPAF2Q8N5M1 289 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 STKLD1Q8NE28 680 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 ACMSDQ8TDX5 336 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 DCAKDQ8WVC6 231 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 DPF3Q92784 378 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 CASP10Q92851 521 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 FBXO32Q969P5 355 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 FCRL5Q96RD9 977 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 PRMT1Q99873 361 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 WDR83Q9BRX9 315 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 ZYG11BQ9C0D3 744 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 IL22Q9GZX6 179 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TSPAN10Q9H1Z9 355 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 VPS11Q9H270 941 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 NMUR1Q9HB89 426 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 ANLNQ9NQW6 1124 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms