RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 RSPH14Q9UHP6 348 aa17.97■□□□□ 0.47
PSEN1-206ENST00000553447 MYO9BQ13459 2157 aa17.97■□□□□ 0.47
PSEN1-206ENST00000553447 E7EVH7 732 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 J3KR12 359 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 LUC7L3O95232 432 aaKnown RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 PEX11BO96011 259 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 APRTP07741 180 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 FSHRP23945 695 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 WEE1P30291 646 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 CD68P34810 354 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 ARL4CP56559 192 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 CBX2Q14781 532 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 HIF1AQ16665 826 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 MPPE1Q53F39 396 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 SYCP2LQ5T4T6 812 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 CXorf57Q6NSI4 855 aaKnown RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 SYCE2Q6PIF2 218 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 PPP1R21Q6ZMI0 780 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 ZNF783Q6ZMS7 281 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 RELL1Q8IUW5 271 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 ARID3BQ8IVW6 561 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 CNTD1Q8N815 330 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 MCUQ8NE86 351 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 OR7D4Q8NG98 312 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 OR52K2Q8NGK3 314 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 UBLCP1Q8WVY7 318 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 APOL5Q9BWW9 433 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 PHACTR1Q9C0D0 580 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 EIF2B3Q9NR50 452 aaKnown RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 LMCD1Q9NZU5 365 aa17.96■□□□□ 0.47
PSEN1-206ENST00000553447 LAMA2P24043 3122 aaKnown RBP17.96■□□□□ 0.47
PSEN1-206ENST00000553447 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 A0A0D9SEW6 157 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 F5H423 210 aaPredicted RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 H0Y626 953 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 EIF3HO15372 352 aaKnown RBP eCLIP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 PRAMEF11O60813 436 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 NFKB1P19838 968 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 LMAN1P49257 510 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 HNRNPDQ14103 355 aaKnown RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 LRIT3Q3SXY7 679 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 MPP7Q5T2T1 576 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 CFAP58Q5T655 872 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 ALS2CLQ60I27 953 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 CENPUQ71F23 418 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 TRMT10CQ7L0Y3 403 aaKnown RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 CARNMT1Q8N4J0 409 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 DDI1Q8WTU0 396 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 NSMCE1Q8WV22 266 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 GORASP1Q9BQQ3 440 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 FRMD8Q9BZ67 464 aaPredicted RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 EPB41L4BQ9H329 900 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 PABPC3Q9H361 631 aaKnown RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 ACBD3Q9H3P7 528 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 CDC42EP4Q9H3Q1 356 aaKnown RBP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 SEMA4AQ9H3S1 761 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 KIF9Q9HAQ2 790 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 SAYSD1Q9NPB0 183 aa17.95■□□□□ 0.46
PSEN1-206ENST00000553447 RBM22Q9NW64 420 aaKnown RBP eCLIP17.95■□□□□ 0.46
PSEN1-206ENST00000553447 MYOFQ9NZM1 2061 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 E7ESA3 106 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 KDELR3O43731 214 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 CACNG3O60359 315 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 HLA-DQB2P05538 268 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 HOXD9P28356 352 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 ETFBP38117 255 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 RENBPP51606 427 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 CDK16Q00536 496 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 CBLBQ13191 982 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 ADAM15Q13444 863 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 FNBP1LQ5T0N5 605 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 RNF219Q5W0B1 726 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 IL31Q6EBC2 164 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 MTERF4Q7Z6M4 381 aaKnown RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 NPAS3Q8IXF0 933 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 IQCKQ8N0W5 287 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 PDIK1LQ8N165 341 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 TEX26Q8N6G2 289 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 CELF5Q8N6W0 485 aaKnown RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 PABPC5Q96DU9 382 aaKnown RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 ZNF419Q96HQ0 510 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 SPON2Q9BUD6 331 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 ACE2Q9BYF1 805 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-206ENST00000553447 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 GLOD4Q9HC38 313 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 TBC1D14Q9P2M4 693 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 DENND4AQ7Z401 1863 aa17.94■□□□□ 0.46
PSEN1-206ENST00000553447 KIF26AQ9ULI4 1882 aaPredicted RBP17.93■□□□□ 0.46
PSEN1-206ENST00000553447 A0A1W2PPC1 479 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 CYBBP04839 570 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 HOXB8P17481 243 aaPredicted RBP17.93■□□□□ 0.46
PSEN1-206ENST00000553447 MAGEA4P43358 317 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 IFNAR2P48551 515 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 OXCT1P55809 520 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 TNK2Q07912 1038 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 SLC10A7Q0GE19 358 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 PDIA2Q13087 525 aaKnown RBP17.93■□□□□ 0.46
PSEN1-206ENST00000553447 CDH18Q13634 790 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 PRPSAP1Q14558 356 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 MARC1Q5VT66 337 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms