RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 HNRNPA0Q13151 305 aaKnown RBP5.56□□□□□ -1.52
ATXN3-218ENST00000553309 ST3GAL2Q16842 350 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 FAM110CQ1W6H9 321 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 ANO1Q5XXA6 986 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 RANBP10Q6VN20 620 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 SLC39A5Q6ZMH5 540 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 FSTL5Q8N475 847 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-218ENST00000553309 LINC01465Q8N7H1 131 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 FAM71DQ8N9W8 422 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 DENND1AQ8TEH3 1009 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 HERVK_113Q902F9 699 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 USP29Q9HBJ7 922 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 HEYLQ9NQ87 328 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-218ENST00000553309 GAR1Q9NY12 217 aaKnown RBP5.56□□□□□ -1.52
ATXN3-218ENST00000553309 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-218ENST00000553309 KNSTRNQ9Y448 316 aa5.56□□□□□ -1.52
ATXN3-218ENST00000553309 A0A0G2JMZ2 1700 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 POM121BA6NF01 834 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 TTC36A6NLP5 189 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 FCHO1O14526 889 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 TMEM225BP0DP42 221 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 ATF7P17544 494 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-218ENST00000553309 ADRA1DP25100 572 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 RBL1P28749 1068 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 MMP13P45452 471 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 COPAP53621 1224 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 FHL3Q13643 280 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-218ENST00000553309 CLCA4Q14CN2 919 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 LARS2Q15031 903 aaKnown RBP5.55□□□□□ -1.52
ATXN3-218ENST00000553309 PNPLA1Q8N8W4 532 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 ZNF398Q8TD17 642 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 EDC3Q96F86 508 aaKnown RBP5.55□□□□□ -1.52
ATXN3-218ENST00000553309 LRRC46Q96FV0 321 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 C8orf48Q96LL4 319 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 MAP7D2Q96T17 732 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 TBCBQ99426 244 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 FAM118BQ9BPY3 351 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 SELENOOQ9BVL4 669 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 SARGQ9BW04 601 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 SLC25A32Q9H2D1 315 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 SLC28A3Q9HAS3 691 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 ZHX2Q9Y6X8 837 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
ATXN3-218ENST00000553309 RPAP1Q9BWH6 1393 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-218ENST00000553309 CHD7Q9P2D1 2997 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 DNM1LO00429 736 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 CXCL11O14625 94 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 BCAR3O75815 825 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 CLTBP09497 229 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 ALADP13716 330 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 SLC5A1P13866 664 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 MYOGP15173 224 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 ATP5F1P24539 256 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 KCNB1Q14721 858 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 MFSD13AQ14CX5 517 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 TRIP6Q15654 476 aaKnown RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 HSP90AB4PQ58FF6 505 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 CC2D1BQ5T0F9 858 aaKnown RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 LRCH2Q5VUJ6 765 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 VSTM1Q6UX27 236 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 FASTKD5Q7L8L6 764 aaKnown RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 LIX1LQ8IVB5 337 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 CCDC33Q8N5R6 958 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 PNISRQ8TF01 805 aaKnown RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 GJB4Q9NTQ9 266 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 COG5Q9UP83 839 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 LAS1LQ9Y4W2 734 aaKnown RBP5.54□□□□□ -1.52
ATXN3-218ENST00000553309 MTCH2Q9Y6C9 303 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 RLFQ13129 1914 aa5.54□□□□□ -1.52
ATXN3-218ENST00000553309 COL4A6Q14031 1691 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 EPOPA6NHQ4 379 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 KBTBD13C9JR72 458 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 APAF1O14727 1248 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 DCXO43602 365 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 COQ9O75208 318 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 TAF5LO75529 589 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 RNF8O76064 485 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 IL9P15248 144 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 HTR7P34969 479 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 STT3AP46977 705 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 PRIM2P49643 509 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 CASP5P51878 434 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 GPC5P78333 572 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 GHRHRQ02643 423 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 KRTAP1-1Q07627 177 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 SAFBQ15424 915 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATXN3-218ENST00000553309 RAB30Q15771 203 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 KRT24Q2M2I5 525 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 GRHL2Q6ISB3 625 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 P3H2Q8IVL5 708 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 CCAR1Q8IX12 1150 aaKnown RBP5.53□□□□□ -1.52
ATXN3-218ENST00000553309 CCDC150Q8NCX0 1101 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 MBD3L2Q8NHZ7 208 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-218ENST00000553309 SUN3Q8TAQ9 357 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-218ENST00000553309 LPAR1Q92633 364 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms