RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ASNSD1Q9NWL6 643 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 HCFC1R1Q9NWW0 138 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 SYBUQ9NX95 663 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 BCCIPQ9P287 314 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 DTX4Q9Y2E6 619 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 HEMK1Q9Y5R4 338 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 KAT6BQ8WYB5 2073 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 WDR33Q9C0J8 1336 aaKnown RBP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-209ENST00000553280 C16orf96A6NNT2 1141 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 AGAP14A8MT82 685 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 B4DLN1 442 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 MCIDASD6RGH6 385 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 SEC14L2O76054 403 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ESRRBO95718 433 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ENO1P06733 434 aaKnown RBP5.43□□□□□ -1.54
SCFD1-209ENST00000553280 AKR1B1P15121 316 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 TGM2P21980 687 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 GSTM2P28161 218 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 TM4SF1P30408 202 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ICAM3P32942 547 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ACTN2P35609 894 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 VPS41P49754 854 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 EFNB1P98172 346 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 DPTQ07507 201 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 WTAPQ15007 396 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 PTPAQ15257 358 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 MFSD4BQ5TF39 518 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 AADACL2Q6P093 401 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 C17orf99Q6UX52 265 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 IKBIPQ70UQ0 350 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 RTL10Q7L3V2 364 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 RRM2BQ7LG56 351 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 CNTROBQ8N137 903 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 PLD5Q8N7P1 536 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 SETD9Q8NE22 299 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 FAM110DQ8TAY7 271 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-209ENST00000553280 HIC2Q96JB3 615 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 HS6ST2Q96MM7 605 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ABHD14AQ9BUJ0 271 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 TRIM2Q9C040 744 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 TMEM248Q9NWD8 314 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ASIC5Q9NY37 505 aa5.43□□□□□ -1.54
SCFD1-209ENST00000553280 ADD3Q9UEY8 706 aaKnown RBP5.43□□□□□ -1.54
SCFD1-209ENST00000553280 A0A087X1B8 175 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 C17orf113A0A1B0GUU1 675 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 PTGES3LE9PB15 166 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 GCOM1H8Y6P7 765 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 EXOC3O60645 756 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 TSPAN9O75954 239 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 NFKBIAP25963 317 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 KRT20P35900 424 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 INHBCP55103 352 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 CYP4F2P78329 520 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 POU5F1Q01860 360 aaKnown RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 NEXNQ0ZGT2 675 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 DUSP28Q4G0W2 176 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 FAM133BQ5BKY9 247 aaKnown RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 ZNF667Q5HYK9 610 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 DCDC5Q6ZRR9 648 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 RNF144BQ7Z419 303 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 MDGA2Q7Z553 956 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 ZNF804AQ7Z570 1209 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 LDLRAD3Q86YD5 345 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 CELF1Q92879 486 aaKnown RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 PERPQ96FX8 193 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 P2RY11Q96G91 374 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 FYTTD1Q96QD9 318 aaKnown RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 PIP5K1AQ99755 562 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 GATA5Q9BWX5 397 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-209ENST00000553280 TXNRD2Q9NNW7 524 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 IL1RAPL1Q9NZN1 696 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 LRIT1Q9P2V4 623 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 C11orf21Q9P2W6 132 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 PEMTQ9UBM1 199 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 ST3GAL5Q9UNP4 418 aa5.42□□□□□ -1.54
SCFD1-209ENST00000553280 TEX13CA0A0J9YWL9 993 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 hCG_1807616A0A1W2PRN6 198 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 TCRBV5S1A1TA0A578 114 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 LIPT2A6NK58 231 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 VILLO15195 856 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 HBP1O60381 514 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 HLA-DQA2P01906 255 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 TYK2P29597 1187 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 ADRA1BP35368 520 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 CPOXP36551 454 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 CTCFP49711 727 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-209ENST00000553280 MC1RQ01726 317 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 KCNB1Q14721 858 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 LARS2Q15031 903 aaKnown RBP5.41□□□□□ -1.54
SCFD1-209ENST00000553280 CDC73Q6P1J9 531 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 TMEM81Q6P7N7 255 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 TMEM65Q6PI78 240 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 SLC30A9Q6PML9 568 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 TMCO3Q6UWJ1 677 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 VSTM1Q6UX27 236 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 NAPRTQ6XQN6 538 aa5.41□□□□□ -1.54
SCFD1-209ENST00000553280 KRT77Q7Z794 578 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms