RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 K7ERQ8 282 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 CER1O95813 267 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 UNGP13051 313 aaPredicted RBP16.3■□□□□ 0.2
CDK4-215ENST00000553237 OR1E1P30953 314 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 VASPP50552 380 aaPredicted RBP16.3■□□□□ 0.2
CDK4-215ENST00000553237 KRT83P78385 493 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 KCNT1Q5JUK3 1230 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 ARTNQ5T4W7 220 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 ARCQ7LC44 396 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 ADAT2Q7Z6V5 191 aaKnown RBP16.3■□□□□ 0.2
CDK4-215ENST00000553237 ATP11CQ8NB49 1132 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 OR7D4Q8NG98 312 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 SETD7Q8WTS6 366 aaKnown RBP16.3■□□□□ 0.2
CDK4-215ENST00000553237 SLC6A18Q96N87 628 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 ERGIC2Q96RQ1 377 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 FUCA2Q9BTY2 467 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 SPON2Q9BUD6 331 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 TM7SF3Q9NS93 570 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 VPS51Q9UID3 782 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 WASF3Q9UPY6 502 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 PCDHB9Q9Y5E1 797 aa16.3■□□□□ 0.2
CDK4-215ENST00000553237 IGLV3-10A0A075B6K4 115 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3DA0A087WVF3 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3IA0A087WXS9 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3EA0A087X179 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3KA0A087X1G2 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 A0A1W2PPC4 97 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3FA6NER0 549 aaPredicted RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3LB9A6J9 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 HYAL3O43820 417 aaPredicted RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 ENDOD1O94919 500 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3HP0C7X1 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 SRCP12931 536 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 GLDCP23378 1020 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 RRM1P23921 792 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 SDC4P31431 198 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 DRD3P35462 400 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 NSFP46459 744 aaKnown RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 GRIA4P48058 902 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 ZNF165P49910 485 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 ADPRHP54922 357 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 PTP4A2Q12974 167 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TRIP6Q15654 476 aaKnown RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 CLEC16AQ2KHT3 1053 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 C6orf118Q5T5N4 469 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3GQ6DHY5 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3CQ6IPX1 549 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 LINGO4Q6UY18 593 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 DSG4Q86SJ6 1040 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 SETD3Q86TU7 594 aaPredicted RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 TBC1D3Q8IZP1 549 aaPredicted RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 C2orf49Q9BVC5 232 aaPredicted RBP16.29■□□□□ 0.2
CDK4-215ENST00000553237 SCNM1Q9BWG6 230 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 OSGEPQ9NPF4 335 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 ADAM22Q9P0K1 906 aa16.29■□□□□ 0.2
CDK4-215ENST00000553237 MAP1BP46821 2468 aaKnown RBP16.28■□□□□ 0.2
CDK4-215ENST00000553237 CEP295Q9C0D2 2601 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 C2CD4BA6NLJ0 364 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 SMTNL1A8MU46 457 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 MCF2LO15068 1137 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 TEX33O43247 280 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 SMAD6O43541 496 aaKnown RBP16.28■□□□□ 0.2
CDK4-215ENST00000553237 RTN2O75298 545 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 KRT3P12035 628 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 RACK1P63244 317 aaKnown RBP16.28■□□□□ 0.2
CDK4-215ENST00000553237 HNRNPDQ14103 355 aaKnown RBP16.28■□□□□ 0.2
CDK4-215ENST00000553237 ST3GAL2Q16842 350 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 ACBD5Q5T8D3 534 aaPredicted RBP16.28■□□□□ 0.2
CDK4-215ENST00000553237 FAM46CQ5VWP2 391 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 AGPAT1Q99943 283 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 ZYG11BQ9C0D3 744 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 PPM1HQ9ULR3 514 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 HS3ST2Q9Y278 367 aa16.28■□□□□ 0.2
CDK4-215ENST00000553237 C1QTNF3-AMACRE9PGA6 284 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 H0Y8X5 98 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 CBX4O00257 560 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 WNT9AO14904 365 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 WNT1P04628 370 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 ZNF883P0CG24 379 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 MAT2AP31153 395 aaKnown RBP16.27■□□□□ 0.2
CDK4-215ENST00000553237 RFC1P35251 1148 aaPredicted RBP16.27■□□□□ 0.2
CDK4-215ENST00000553237 ADRA1BP35368 520 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 CCR5P51681 352 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 C21orf59P57076 290 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 PPP2CBP62714 309 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 PPP2CAP67775 309 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 CNTN1Q12860 1018 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 SKOR2Q2VWA4 1001 aaPredicted RBP16.27■□□□□ 0.2
CDK4-215ENST00000553237 ARL13BQ3SXY8 428 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 PRAMEF14Q5SWL7 426 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 DRC7Q8IY82 874 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 CHCHD4Q8N4Q1 142 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 DCAF4L2Q8NA75 395 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 SELENOOQ9BVL4 669 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 ACE2Q9BYF1 805 aaPredicted RBP16.27■□□□□ 0.2
CDK4-215ENST00000553237 AASDHPPTQ9NRN7 309 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms