RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 SRCP12931 536 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 VAV1P15498 845 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 GOT1P17174 413 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 BCKDHBP21953 392 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 EPHB2P29323 1055 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 FNDC3BQ53EP0 1204 aaKnown RBP10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 BOLA3Q53S33 107 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 KCNT1Q5JUK3 1230 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 POLNQ7Z5Q5 900 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 RHOT2Q8IXI1 618 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 SH2D3CQ8N5H7 860 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 FRMD1Q8N878 549 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 HMGB4Q8WW32 186 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 FAF2Q96CS3 445 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 RPL10LQ96L21 214 aaKnown RBP10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 CSPG4P5Q96PW8 444 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 FAM129BQ96TA1 746 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 TPSD1Q9BZJ3 242 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 MAGEH1Q9H213 219 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 DHX35Q9H5Z1 703 aaKnown RBP10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 FBRSQ9HAH7 460 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 LCMT1Q9UIC8 334 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 VPS28Q9UK41 221 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 SMG5Q9UPR3 1016 aaKnown RBP10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 PCDHA13Q9Y5I0 950 aa10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 EPN1Q9Y6I3 576 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO1-222ENST00000553154 IGHV1OR15-9A0A0B4J2B8 117 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 TARSL2A2RTX5 802 aaKnown RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 C3orf70A6NLC5 250 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 RNF103O00237 685 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 SMAD6O43541 496 aaKnown RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 CREB3O43889 395 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 RAMP2O60895 175 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ALDH1A2O94788 518 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 MOCS3O95396 460 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 EPHX1P07099 455 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 DESP17661 470 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ERCC2P18074 760 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 TGM1P22735 817 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 CYLC1P35663 651 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ARHGAP25P42331 645 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 MAGEA1P43355 309 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 NUMBP49757 651 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 SERPINH1P50454 418 aaKnown RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 CLCN6P51797 869 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 YBEYP58557 167 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 TPI1P60174 286 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 RPS14P62263 151 aaKnown RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 STARD3Q14849 445 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 SMTNL2Q2TAL5 461 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 PLK5Q496M5 336 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ATP13A4Q4VNC1 1196 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 LRRC38Q5VT99 294 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 PMS2CLQ68D20 193 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 SDE2Q6IQ49 451 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 RWDD4Q6NW29 188 aaKnown RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 KBTBD6Q86V97 674 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 CCDC117Q8IWD4 279 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 SPC24Q8NBT2 197 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ATRIPQ8WXE1 791 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 HMCESQ96FZ2 354 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 PPP1R9BQ96SB3 815 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 BAG1Q99933 345 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 C2orf49Q9BVC5 232 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 LACRTQ9GZZ8 138 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 GRPEL1Q9HAV7 217 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ITM2CQ9NQX7 267 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 RCOR3Q9P2K3 495 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 DNAI1Q9UI46 699 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 PLA2G4CQ9UP65 541 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 MFHAS1Q9Y4C4 1052 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 ACTL7AQ9Y615 435 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 DNAH14Q0VDD8 3507 aa10.35□□□□□ -0.75
CALCOCO1-222ENST00000553154 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 EDDM13A0A1B0GTR0 161 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 ZNF487B1APH4 448 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 RASA4BC9J798 803 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 EEF2KO00418 725 aaKnown RBP10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 RASA4O43374 803 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 KDELR3O43731 214 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 BUB1BO60566 1050 aaPredicted RBP10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 PEX11BO96011 259 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 CD48P09326 243 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 ETFBP38117 255 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 NDST2P52849 883 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 ZBTB16Q05516 673 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 SERINC3Q13530 473 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 DPYSL3Q14195 570 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 ELAVL3Q14576 367 aaKnown RBP10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 TAZQ16635 292 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 PARP15Q460N3 678 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 C11orf63Q6NUN7 778 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 C22orf39Q6P5X5 142 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 LINGO4Q6UY18 593 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 Q6ZVU0 165 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 VSIG1Q86XK7 387 aa10.34□□□□□ -0.75
CALCOCO1-222ENST00000553154 TMPRSS6Q8IU80 811 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms