RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 IL31Q6EBC2 164 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 KIAA1324Q6UXG2 1013 aaKnown RBP14.45□□□□□ -0.1
PTCH1-226ENST00000553011 OR2T3Q8NH03 318 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 GAB3Q8WWW8 586 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 ARHGEF2Q92974 986 aaKnown RBP14.45□□□□□ -0.1
PTCH1-226ENST00000553011 DESI2Q9BSY9 194 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 ACE2Q9BYF1 805 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-226ENST00000553011 MAGEH1Q9H213 219 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 PCDH18Q9HCL0 1135 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 CD93Q9NPY3 652 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 LUC7LQ9NQ29 371 aaKnown RBP14.45□□□□□ -0.1
PTCH1-226ENST00000553011 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 SUN2Q9UH99 717 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 LCMT1Q9UIC8 334 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 HYOU1Q9Y4L1 999 aa14.45□□□□□ -0.1
PTCH1-226ENST00000553011 EDDM13A0A1B0GTR0 161 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 RASA4BC9J798 803 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 PROB1E7EW31 1015 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 H3BRJ5 948 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 K7ERQ8 282 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ZBTB24O43167 697 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-226ENST00000553011 DAPK3O43293 454 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 RASA4O43374 803 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 SMAD6O43541 496 aaKnown RBP14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ATP9BO43861 1147 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ZMPSTE24O75844 475 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 SRCP12931 536 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 CNR2P34972 360 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 NNMTP40261 264 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ARHGAP25P42331 645 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 HCAR3P49019 387 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 CDH6P55285 790 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ARF5P84085 180 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 DPYSQ14117 519 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 POLD3Q15054 466 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-226ENST00000553011 LPAL2Q16609 132 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 MAP7D1Q3KQU3 841 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ACCSLQ4AC99 568 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 USP39Q53GS9 565 aaKnown RBP14.44□□□□□ -0.1
PTCH1-226ENST00000553011 C9orf64Q5T6V5 341 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 POLNQ7Z5Q5 900 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 TMPRSS6Q8IU80 811 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 UMODL1-AS1Q8N2C9 162 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 SH2D3CQ8N5H7 860 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 FRMD1Q8N878 549 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 NETO2Q8NC67 525 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 FRS2Q8WU20 508 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 HMCESQ96FZ2 354 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 CELF6Q96J87 481 aaKnown RBP14.44□□□□□ -0.1
PTCH1-226ENST00000553011 KLC2Q9H0B6 622 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 SALL4Q9UJQ4 1053 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 HS3ST2Q9Y278 367 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 MFHAS1Q9Y4C4 1052 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ACTL7AQ9Y615 435 aa14.44□□□□□ -0.1
PTCH1-226ENST00000553011 ZNF292O60281 2723 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 MYO15AQ9UKN7 3530 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 A0A0A6YYK5 440 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 TARSL2A2RTX5 802 aaKnown RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 BUB1BO60566 1050 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 CD48P09326 243 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 BCKDHBP21953 392 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 AMPD1P23109 780 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ETFBP38117 255 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ARL4AP40617 200 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 P2RY2P41231 377 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ARSEP51690 589 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 VAV2P52735 878 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ZNF135P52742 658 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 HADHBP55084 474 aaKnown RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 MMRN1Q13201 1228 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 SIM2Q14190 667 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 KRT81Q14533 505 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 DLG2Q15700 870 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 LEKR1Q6ZMV7 388 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 PRR23BQ6ZRT6 265 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 CEP68Q76N32 757 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ZNF354CQ86Y25 554 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 FAM160A2Q8N612 972 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 NPWQ8N729 165 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 SUMF1Q8NBK3 374 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 TSC1Q92574 1164 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 PTPRN2Q92932 1015 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 NKD2Q969F2 451 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 FAM122AQ96E09 287 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 SIPA1Q96FS4 1042 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 CSPG4P5Q96PW8 444 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 LACRTQ9GZZ8 138 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 EPC1Q9H2F5 836 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 GOLPH3Q9H4A6 298 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 LRRC19Q9H756 370 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 PRDM16Q9HAZ2 1276 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 ETNK2Q9NVF9 386 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 DUSP10Q9Y6W6 482 aa14.43□□□□□ -0.1
PTCH1-226ENST00000553011 TNRC6BQ9UPQ9 1833 aaKnown RBP14.43□□□□□ -0.1
PTCH1-226ENST00000553011 KNL1Q8NG31 2342 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 DMDP11532 3685 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 DOCK9Q9BZ29 2069 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 A0A0U1RQJ8 604 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms