RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CGRRF1Q99675 332 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 OMDQ99983 421 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SDCBP2Q9H190 292 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 RSPH9Q9H1X1 276 aaPredicted RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ERVMER34-1Q9H9K5 563 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 OLFML3Q9NRN5 406 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ABCB8Q9NUT2 735 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 DNAJB12Q9NXW2 375 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 HSPBP1Q9NZL4 362 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 HMGXB4Q9UGU5 601 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SUN2Q9UH99 717 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 GGA2Q9UJY4 613 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SATB2Q9UPW6 733 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SPENQ96T58 3664 aaKnown RBP5.59□□□□□ -1.52
HOXB3-213ENST00000552000 NYNRINQ9P2P1 1898 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PKDREJQ9NTG1 2253 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PMS2P1A4D2B8 440 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 SUV39H1O43463 412 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 RNASEH1O60930 286 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PHACTR2O75167 634 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 KIF20AO95235 890 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 AFPP02771 609 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 ATP5BP06576 529 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CENPBP07199 599 aaPredicted RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 ATICP31939 592 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 LONP1P36776 959 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PSMD8P48556 350 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CYP2J2P51589 502 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 KIF11P52732 1056 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 NDST1P52848 882 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PPP2CBP62714 309 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PPP2CAP67775 309 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 TLE1Q04724 770 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CYP24A1Q07973 514 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 BIRC3Q13489 604 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PSMD6Q15008 389 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 ARL13BQ3SXY8 428 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 LINC00303Q3SY05 128 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 MPPE1Q53F39 396 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 HS1BP3Q53T59 392 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 SGO2Q562F6 1265 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 TBCELQ5QJ74 424 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 NAPEPLDQ6IQ20 393 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 IGF2-ASQ6U949 168 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CLEC20AQ6ZU45 233 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 SV2BQ7L1I2 683 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 RSRC2Q7L4I2 434 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 TADA2BQ86TJ2 420 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 MMAAQ8IVH4 418 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 AHI1Q8N157 1196 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 SLC25A45Q8N413 288 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 MFSD2AQ8NA29 543 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 OR4C6Q8NH72 309 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 OR14C36Q8NHC7 312 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 WFDC5Q8TCV5 224 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 EXTL1Q92935 676 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 HPS3Q969F9 1004 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 ATXN7L3BQ96GX2 97 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CSNK1G1Q9HCP0 422 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 STARD5Q9NSY2 213 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PANK4Q9NVE7 773 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 UCKL1Q9NWZ5 548 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 MARCH2Q9P0N8 246 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 STRIP2Q9ULQ0 834 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 SCML1Q9UN30 329 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 CA5BQ9Y2D0 317 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 KIF3AQ9Y496 699 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PAXBP1Q9Y5B6 917 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 PCDHA5Q9Y5H7 936 aa5.58□□□□□ -1.52
HOXB3-213ENST00000552000 OAS3Q9Y6K5 1087 aaKnown RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 COL27A1Q8IZC6 1860 aaPredicted RBP5.58□□□□□ -1.52
HOXB3-213ENST00000552000 LRRK1Q38SD2 2015 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 SCN8AQ9UQD0 1980 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3DA0A087WVF3 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3IA0A087WXS9 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3EA0A087X179 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3KA0A087X1G2 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 LY6G6EA0A0G2JKS1 128 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 FRMD3A2A2Y4 597 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3FA6NER0 549 aaPredicted RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 C10orf142B7Z368 130 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3LB9A6J9 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 H3BQV1 296 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CLIC2O15247 247 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 GSC2O15499 205 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 FAM87AP0C7U9 286 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3HP0C7X1 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CKMT1AP12532 417 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 ITGB6P18564 788 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 POLR2EP19388 210 aaKnown RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CR2P20023 1033 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 DGKAP23743 735 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 MAT2AP31153 395 aaKnown RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 SLC8A1P32418 973 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CD70P32970 193 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 HOXD13P35453 343 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CASP4P49662 377 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms